Gene info for HMPREF1078_RS12445 in Parabacteroides merdae CL09T00C40

Annotation: heparinase II/III family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, - strand, nucleotides 487,088 to 488,917
See nucleotide sequence around HMPREF1078_RS12445 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS12420 and HMPREF1078_RS12425 are separated by 54 nucleotidesHMPREF1078_RS12425 and HMPREF1078_RS12430 are separated by 54 nucleotidesHMPREF1078_RS12430 and HMPREF1078_RS12435 are separated by 13 nucleotidesHMPREF1078_RS12435 and HMPREF1078_RS12440 are separated by 497 nucleotidesHMPREF1078_RS12440 and HMPREF1078_RS12445 are separated by 76 nucleotidesHMPREF1078_RS12445 and HMPREF1078_RS12450 are separated by 378 nucleotidesHMPREF1078_RS12450 and HMPREF1078_RS12455 are separated by 77 nucleotidesHMPREF1078_RS12455 and HMPREF1078_RS12460 are separated by 195 nucleotidesHMPREF1078_RS12460 and HMPREF1078_RS12465 are separated by 93 nucleotidesHMPREF1078_RS12465 and HMPREF1078_RS12470 are separated by 1002 nucleotides HMPREF1078_RS12420: HMPREF1078_RS12420 - efflux RND transporter periplasmic adaptor subunit, at 475,873 to 476,937 _RS12420 HMPREF1078_RS12425: HMPREF1078_RS12425 - efflux RND transporter permease subunit, at 476,992 to 480,075 _RS12425 HMPREF1078_RS12430: HMPREF1078_RS12430 - TolC family protein, at 480,130 to 481,575 _RS12430 HMPREF1078_RS12435: HMPREF1078_RS12435 - efflux RND transporter permease subunit, at 481,589 to 484,855 _RS12435 HMPREF1078_RS12440: HMPREF1078_RS12440 - O-antigen ligase family protein, at 485,353 to 487,011 _RS12440 HMPREF1078_RS12445: HMPREF1078_RS12445 - heparinase II/III family protein, at 487,088 to 488,917 _RS12445 HMPREF1078_RS12450: HMPREF1078_RS12450 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit, at 489,296 to 492,514 _RS12450 HMPREF1078_RS12455: HMPREF1078_RS12455 - transcriptional regulator, at 492,592 to 494,649 _RS12455 HMPREF1078_RS12460: HMPREF1078_RS12460 - FAD-dependent oxidoreductase, at 494,845 to 496,221 _RS12460 HMPREF1078_RS12465: HMPREF1078_RS12465 - 6-bladed beta-propeller, at 496,315 to 497,478 _RS12465 HMPREF1078_RS12470: HMPREF1078_RS12470 - ABC transporter substrate-binding protein, at 498,481 to 499,608 _RS12470
Locus Name Description Strand Phenotype
HMPREF1078_RS12420 HMPREF1078_RS12420 efflux RND transporter periplasmic adaptor subunit + cofit
HMPREF1078_RS12425 HMPREF1078_RS12425 efflux RND transporter permease subunit + insig.
HMPREF1078_RS12430 HMPREF1078_RS12430 TolC family protein + insig.
HMPREF1078_RS12435 HMPREF1078_RS12435 efflux RND transporter permease subunit + cofit
HMPREF1078_RS12440 HMPREF1078_RS12440 O-antigen ligase family protein + insig.
HMPREF1078_RS12445 HMPREF1078_RS12445 heparinase II/III family protein - insig.
HMPREF1078_RS12450 HMPREF1078_RS12450 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit + strong
HMPREF1078_RS12455 HMPREF1078_RS12455 transcriptional regulator + strong
HMPREF1078_RS12460 HMPREF1078_RS12460 FAD-dependent oxidoreductase + strong
HMPREF1078_RS12465 HMPREF1078_RS12465 6-bladed beta-propeller - insig.
HMPREF1078_RS12470 HMPREF1078_RS12470 ABC transporter substrate-binding protein - strong

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