Gene info for HMPREF1078_RS12330 in Parabacteroides merdae CL09T00C40

Annotation: FecR domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, - strand, nucleotides 458,193 to 459,038
See nucleotide sequence around HMPREF1078_RS12330 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS12305 and HMPREF1078_RS12310 overlap by 14 nucleotidesHMPREF1078_RS12310 and HMPREF1078_RS12315 are separated by 12 nucleotidesHMPREF1078_RS12315 and HMPREF1078_RS12320 are separated by 76 nucleotidesHMPREF1078_RS12320 and HMPREF1078_RS12325 are separated by 5 nucleotidesHMPREF1078_RS12325 and HMPREF1078_RS12330 are separated by 5 nucleotidesHMPREF1078_RS12330 and HMPREF1078_RS12335 are separated by 55 nucleotidesHMPREF1078_RS12335 and HMPREF1078_RS12340 are separated by 81 nucleotidesHMPREF1078_RS12340 and HMPREF1078_RS12345 are separated by 217 nucleotidesHMPREF1078_RS12345 and HMPREF1078_RS12350 are separated by 228 nucleotidesHMPREF1078_RS12350 and HMPREF1078_RS12360 are separated by 1088 nucleotides HMPREF1078_RS12305: HMPREF1078_RS12305 - endonuclease/exonuclease/phosphatase family protein, at 449,757 to 450,656 _RS12305 HMPREF1078_RS12310: HMPREF1078_RS12310 - DUF4249 domain-containing protein, at 450,643 to 451,650 _RS12310 HMPREF1078_RS12315: HMPREF1078_RS12315 - TonB-dependent receptor, at 451,663 to 454,422 _RS12315 HMPREF1078_RS12320: HMPREF1078_RS12320 - DUF4249 domain-containing protein, at 454,499 to 455,521 _RS12320 HMPREF1078_RS12325: HMPREF1078_RS12325 - TonB-dependent receptor, at 455,527 to 458,187 _RS12325 HMPREF1078_RS12330: HMPREF1078_RS12330 - FecR domain-containing protein, at 458,193 to 459,038 _RS12330 HMPREF1078_RS12335: HMPREF1078_RS12335 - porin family protein, at 459,094 to 459,852 _RS12335 HMPREF1078_RS12340: HMPREF1078_RS12340 - RNA polymerase sigma-70 factor, at 459,934 to 460,449 _RS12340 HMPREF1078_RS12345: HMPREF1078_RS12345 - tryptophan--tRNA ligase, at 460,667 to 461,719 _RS12345 HMPREF1078_RS12350: HMPREF1078_RS12350 - 6-bladed beta-propeller, at 461,948 to 462,949 _RS12350 HMPREF1078_RS12360: HMPREF1078_RS12360 - hypothetical protein, at 464,038 to 465,150 _RS12360
Locus Name Description Strand Phenotype
HMPREF1078_RS12305 HMPREF1078_RS12305 endonuclease/exonuclease/phosphatase family protein + insig.
HMPREF1078_RS12310 HMPREF1078_RS12310 DUF4249 domain-containing protein - insig.
HMPREF1078_RS12315 HMPREF1078_RS12315 TonB-dependent receptor - insig.
HMPREF1078_RS12320 HMPREF1078_RS12320 DUF4249 domain-containing protein - cofit
HMPREF1078_RS12325 HMPREF1078_RS12325 TonB-dependent receptor - cofit
HMPREF1078_RS12330 HMPREF1078_RS12330 FecR domain-containing protein - sig.
HMPREF1078_RS12335 HMPREF1078_RS12335 porin family protein - insig.
HMPREF1078_RS12340 HMPREF1078_RS12340 RNA polymerase sigma-70 factor - cofit
HMPREF1078_RS12345 HMPREF1078_RS12345 tryptophan--tRNA ligase - no data
HMPREF1078_RS12350 HMPREF1078_RS12350 6-bladed beta-propeller + insig.
HMPREF1078_RS12360 HMPREF1078_RS12360 hypothetical protein - insig.

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