Gene info for HMPREF1078_RS12185 in Parabacteroides merdae CL09T00C40

Annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, + strand, nucleotides 415,599 to 416,102
See nucleotide sequence around HMPREF1078_RS12185 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS12160 and HMPREF1078_RS12165 are separated by 40 nucleotidesHMPREF1078_RS12165 and HMPREF1078_RS12170 are separated by 38 nucleotidesHMPREF1078_RS12170 and HMPREF1078_RS12175 are separated by 144 nucleotidesHMPREF1078_RS12175 and HMPREF1078_RS12180 are separated by 6 nucleotidesHMPREF1078_RS12180 and HMPREF1078_RS12185 are separated by 105 nucleotidesHMPREF1078_RS12185 and HMPREF1078_RS12190 are separated by 105 nucleotidesHMPREF1078_RS12190 and HMPREF1078_RS12195 are separated by 20 nucleotidesHMPREF1078_RS12195 and HMPREF1078_RS12200 are separated by 4 nucleotidesHMPREF1078_RS12200 and HMPREF1078_RS12205 are separated by 84 nucleotidesHMPREF1078_RS12205 and HMPREF1078_RS12210 are separated by 36 nucleotides HMPREF1078_RS12160: HMPREF1078_RS12160 - ABC transporter permease, at 406,449 to 408,773 _RS12160 HMPREF1078_RS12165: HMPREF1078_RS12165 - ABC transporter permease, at 408,814 to 411,204 _RS12165 HMPREF1078_RS12170: HMPREF1078_RS12170 - ABC transporter permease, at 411,243 to 413,606 _RS12170 HMPREF1078_RS12175: HMPREF1078_RS12175 - redoxin domain-containing protein, at 413,751 to 414,833 _RS12175 HMPREF1078_RS12180: HMPREF1078_RS12180 - DUF4858 domain-containing protein, at 414,840 to 415,493 _RS12180 HMPREF1078_RS12185: HMPREF1078_RS12185 - hypothetical protein, at 415,599 to 416,102 _RS12185 HMPREF1078_RS12190: HMPREF1078_RS12190 - GntR family transcriptional regulator, at 416,208 to 416,921 _RS12190 HMPREF1078_RS12195: HMPREF1078_RS12195 - sodium/solute symporter, at 416,942 to 419,533 _RS12195 HMPREF1078_RS12200: HMPREF1078_RS12200 - dihydrodipicolinate synthase family protein, at 419,538 to 420,449 _RS12200 HMPREF1078_RS12205: HMPREF1078_RS12205 - TonB-dependent receptor, at 420,534 to 423,698 _RS12205 HMPREF1078_RS12210: HMPREF1078_RS12210 - RagB/SusD family nutrient uptake outer membrane protein, at 423,735 to 425,189 _RS12210
Locus Name Description Strand Phenotype
HMPREF1078_RS12160 HMPREF1078_RS12160 ABC transporter permease + insig.
HMPREF1078_RS12165 HMPREF1078_RS12165 ABC transporter permease + insig.
HMPREF1078_RS12170 HMPREF1078_RS12170 ABC transporter permease + cofit
HMPREF1078_RS12175 HMPREF1078_RS12175 redoxin domain-containing protein + insig.
HMPREF1078_RS12180 HMPREF1078_RS12180 DUF4858 domain-containing protein + insig.
HMPREF1078_RS12185 HMPREF1078_RS12185 hypothetical protein + strong
HMPREF1078_RS12190 HMPREF1078_RS12190 GntR family transcriptional regulator + cofit
HMPREF1078_RS12195 HMPREF1078_RS12195 sodium/solute symporter + cofit
HMPREF1078_RS12200 HMPREF1078_RS12200 dihydrodipicolinate synthase family protein + cofit
HMPREF1078_RS12205 HMPREF1078_RS12205 TonB-dependent receptor + insig.
HMPREF1078_RS12210 HMPREF1078_RS12210 RagB/SusD family nutrient uptake outer membrane protein + insig.

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