Gene info for HMPREF1078_RS12065 in Parabacteroides merdae CL09T00C40

Annotation: START-like domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, + strand, nucleotides 379,301 to 379,684
See nucleotide sequence around HMPREF1078_RS12065 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS12040 and HMPREF1078_RS12045 are separated by 243 nucleotidesHMPREF1078_RS12045 and HMPREF1078_RS12050 are separated by 412 nucleotidesHMPREF1078_RS12050 and HMPREF1078_RS12055 are separated by 1057 nucleotidesHMPREF1078_RS12055 and HMPREF1078_RS12060 are separated by 481 nucleotidesHMPREF1078_RS12060 and HMPREF1078_RS12065 are separated by 198 nucleotidesHMPREF1078_RS12065 and HMPREF1078_RS12070 are separated by 101 nucleotidesHMPREF1078_RS12070 and HMPREF1078_RS12075 are separated by 26 nucleotidesHMPREF1078_RS12075 and HMPREF1078_RS12080 are separated by 25 nucleotidesHMPREF1078_RS12080 and HMPREF1078_RS12085 are separated by 110 nucleotidesHMPREF1078_RS12085 and HMPREF1078_RS12090 are separated by 149 nucleotides HMPREF1078_RS12040: HMPREF1078_RS12040 - fimbrial protein, at 371,376 to 372,587 _RS12040 HMPREF1078_RS12045: HMPREF1078_RS12045 - fimbrial protein, at 372,831 to 374,099 _RS12045 HMPREF1078_RS12050: HMPREF1078_RS12050 - response regulator, at 374,512 to 376,566 _RS12050 HMPREF1078_RS12055: HMPREF1078_RS12055 - FimB/Mfa2 family fimbrial subunit, at 377,624 to 378,547 _RS12055 HMPREF1078_RS12060: HMPREF1078_RS12060 - tRNA-Met, at 379,029 to 379,102 _RS12060 HMPREF1078_RS12065: HMPREF1078_RS12065 - START-like domain-containing protein, at 379,301 to 379,684 _RS12065 HMPREF1078_RS12070: HMPREF1078_RS12070 - LptF/LptG family permease, at 379,786 to 381,723 _RS12070 HMPREF1078_RS12075: HMPREF1078_RS12075 - bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II, at 381,750 to 382,967 _RS12075 HMPREF1078_RS12080: HMPREF1078_RS12080 - pyridoxal phosphate-dependent aminotransferase, at 382,993 to 384,186 _RS12080 HMPREF1078_RS12085: HMPREF1078_RS12085 - translation elongation factor Ts, at 384,297 to 385,286 _RS12085 HMPREF1078_RS12090: HMPREF1078_RS12090 - 30S ribosomal protein S2, at 385,436 to 386,278 _RS12090
Locus Name Description Strand Phenotype
HMPREF1078_RS12040 HMPREF1078_RS12040 fimbrial protein - cofit
HMPREF1078_RS12045 HMPREF1078_RS12045 fimbrial protein - insig.
HMPREF1078_RS12050 HMPREF1078_RS12050 response regulator - insig.
HMPREF1078_RS12055 HMPREF1078_RS12055 FimB/Mfa2 family fimbrial subunit + insig.
HMPREF1078_RS12060 HMPREF1078_RS12060 tRNA-Met - no data
HMPREF1078_RS12065 HMPREF1078_RS12065 START-like domain-containing protein + sig.
HMPREF1078_RS12070 HMPREF1078_RS12070 LptF/LptG family permease + no data
HMPREF1078_RS12075 HMPREF1078_RS12075 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II + no data
HMPREF1078_RS12080 HMPREF1078_RS12080 pyridoxal phosphate-dependent aminotransferase + strong
HMPREF1078_RS12085 HMPREF1078_RS12085 translation elongation factor Ts - no data
HMPREF1078_RS12090 HMPREF1078_RS12090 30S ribosomal protein S2 - no data

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