Gene info for HMPREF1078_RS11985 in Parabacteroides merdae CL09T00C40

Annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, - strand, nucleotides 357,160 to 357,504
See nucleotide sequence around HMPREF1078_RS11985 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS11960 and HMPREF1078_RS11965 are separated by 7 nucleotidesHMPREF1078_RS11965 and HMPREF1078_RS11970 are separated by 389 nucleotidesHMPREF1078_RS11970 and HMPREF1078_RS11975 are separated by 3 nucleotidesHMPREF1078_RS11975 and HMPREF1078_RS11980 overlap by 17 nucleotidesHMPREF1078_RS11980 and HMPREF1078_RS11985 are separated by 173 nucleotidesHMPREF1078_RS11985 and HMPREF1078_RS11990 are separated by 101 nucleotidesHMPREF1078_RS11990 and HMPREF1078_RS11995 are separated by 8 nucleotidesHMPREF1078_RS11995 and HMPREF1078_RS12000 are separated by 233 nucleotidesHMPREF1078_RS12000 and HMPREF1078_RS12005 are separated by 118 nucleotidesHMPREF1078_RS12005 and HMPREF1078_RS12010 are separated by 482 nucleotides HMPREF1078_RS11960: HMPREF1078_RS11960 - transcription termination factor NusA, at 351,400 to 352,674 _RS11960 HMPREF1078_RS11965: HMPREF1078_RS11965 - ribosome assembly cofactor RimP, at 352,682 to 353,149 _RS11965 HMPREF1078_RS11970: HMPREF1078_RS11970 - TonB-dependent receptor plug domain-containing protein, at 353,539 to 355,746 _RS11970 HMPREF1078_RS11975: HMPREF1078_RS11975 - nicotinamide riboside transporter PnuC, at 355,750 to 356,364 _RS11975 HMPREF1078_RS11980: HMPREF1078_RS11980 - thiamine diphosphokinase, at 356,348 to 356,986 _RS11980 HMPREF1078_RS11985: HMPREF1078_RS11985 - hypothetical protein, at 357,160 to 357,504 _RS11985 HMPREF1078_RS11990: HMPREF1078_RS11990 - DUF3868 domain-containing protein, at 357,606 to 359,072 _RS11990 HMPREF1078_RS11995: HMPREF1078_RS11995 - DUF3575 domain-containing protein, at 359,081 to 359,638 _RS11995 HMPREF1078_RS12000: HMPREF1078_RS12000 - hypothetical protein, at 359,872 to 360,267 _RS12000 HMPREF1078_RS12005: HMPREF1078_RS12005 - VapE family protein, at 360,386 to 362,497 _RS12005 HMPREF1078_RS12010: HMPREF1078_RS12010 - hypothetical protein, at 362,980 to 364,482 _RS12010
Locus Name Description Strand Phenotype
HMPREF1078_RS11960 HMPREF1078_RS11960 transcription termination factor NusA - no data
HMPREF1078_RS11965 HMPREF1078_RS11965 ribosome assembly cofactor RimP - strong
HMPREF1078_RS11970 HMPREF1078_RS11970 TonB-dependent receptor plug domain-containing protein + cofit
HMPREF1078_RS11975 HMPREF1078_RS11975 nicotinamide riboside transporter PnuC + strong
HMPREF1078_RS11980 HMPREF1078_RS11980 thiamine diphosphokinase + strong
HMPREF1078_RS11985 HMPREF1078_RS11985 hypothetical protein - insig.
HMPREF1078_RS11990 HMPREF1078_RS11990 DUF3868 domain-containing protein - insig.
HMPREF1078_RS11995 HMPREF1078_RS11995 DUF3575 domain-containing protein - insig.
HMPREF1078_RS12000 HMPREF1078_RS12000 hypothetical protein - insig.
HMPREF1078_RS12005 HMPREF1078_RS12005 VapE family protein - insig.
HMPREF1078_RS12010 HMPREF1078_RS12010 hypothetical protein - insig.

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