Gene info for HMPREF1078_RS11915 in Parabacteroides merdae CL09T00C40

Annotation: RagB/SusD family nutrient uptake outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, + strand, nucleotides 338,974 to 340,458
See nucleotide sequence around HMPREF1078_RS11915 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS11890 and HMPREF1078_RS11895 are separated by 167 nucleotidesHMPREF1078_RS11895 and HMPREF1078_RS11900 are separated by 20 nucleotidesHMPREF1078_RS11900 and HMPREF1078_RS11905 are separated by 109 nucleotidesHMPREF1078_RS11905 and HMPREF1078_RS11910 are separated by 276 nucleotidesHMPREF1078_RS11910 and HMPREF1078_RS11915 are separated by 14 nucleotidesHMPREF1078_RS11915 and HMPREF1078_RS11920 are separated by 141 nucleotidesHMPREF1078_RS11920 and HMPREF1078_RS11925 are separated by 181 nucleotidesHMPREF1078_RS11925 and HMPREF1078_RS11930 are separated by 159 nucleotidesHMPREF1078_RS11930 and HMPREF1078_RS11935 are separated by 9 nucleotidesHMPREF1078_RS11935 and HMPREF1078_RS11940 are separated by 62 nucleotides HMPREF1078_RS11890: HMPREF1078_RS11890 - FecR domain-containing protein, at 326,418 to 327,629 _RS11890 HMPREF1078_RS11895: HMPREF1078_RS11895 - TonB-dependent receptor, at 327,797 to 331,111 _RS11895 HMPREF1078_RS11900: HMPREF1078_RS11900 - RagB/SusD family nutrient uptake outer membrane protein, at 331,132 to 332,604 _RS11900 HMPREF1078_RS11905: HMPREF1078_RS11905 - glycoside hydrolase family 2, at 332,714 to 335,482 _RS11905 HMPREF1078_RS11910: HMPREF1078_RS11910 - TonB-dependent receptor, at 335,759 to 338,959 _RS11910 HMPREF1078_RS11915: HMPREF1078_RS11915 - RagB/SusD family nutrient uptake outer membrane protein, at 338,974 to 340,458 _RS11915 HMPREF1078_RS11920: HMPREF1078_RS11920 - GH92 family glycosyl hydrolase, at 340,600 to 342,885 _RS11920 HMPREF1078_RS11925: HMPREF1078_RS11925 - RNA polymerase sigma-70 factor, at 343,067 to 343,633 _RS11925 HMPREF1078_RS11930: HMPREF1078_RS11930 - VOC family protein, at 343,793 to 344,173 _RS11930 HMPREF1078_RS11935: HMPREF1078_RS11935 - Fe-S cluster assembly protein SufD, at 344,183 to 345,526 _RS11935 HMPREF1078_RS11940: HMPREF1078_RS11940 - Fe-S cluster assembly ATPase SufC, at 345,589 to 346,344 _RS11940
Locus Name Description Strand Phenotype
HMPREF1078_RS11890 HMPREF1078_RS11890 FecR domain-containing protein + insig.
HMPREF1078_RS11895 HMPREF1078_RS11895 TonB-dependent receptor + cofit
HMPREF1078_RS11900 HMPREF1078_RS11900 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1078_RS11905 HMPREF1078_RS11905 glycoside hydrolase family 2 + insig.
HMPREF1078_RS11910 HMPREF1078_RS11910 TonB-dependent receptor + insig.
HMPREF1078_RS11915 HMPREF1078_RS11915 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1078_RS11920 HMPREF1078_RS11920 GH92 family glycosyl hydrolase + insig.
HMPREF1078_RS11925 HMPREF1078_RS11925 RNA polymerase sigma-70 factor + strong
HMPREF1078_RS11930 HMPREF1078_RS11930 VOC family protein - insig.
HMPREF1078_RS11935 HMPREF1078_RS11935 Fe-S cluster assembly protein SufD - no data
HMPREF1078_RS11940 HMPREF1078_RS11940 Fe-S cluster assembly ATPase SufC - no data

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