Gene info for HMPREF1078_RS11895 in Parabacteroides merdae CL09T00C40

Annotation: TonB-dependent receptor
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, + strand, nucleotides 327,797 to 331,111
See nucleotide sequence around HMPREF1078_RS11895 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS11865 and HMPREF1078_RS11870 are separated by 13 nucleotidesHMPREF1078_RS11870 and HMPREF1078_RS11875 are separated by 256 nucleotidesHMPREF1078_RS11875 and HMPREF1078_RS11885 are separated by 864 nucleotidesHMPREF1078_RS11885 and HMPREF1078_RS11890 are separated by 80 nucleotidesHMPREF1078_RS11890 and HMPREF1078_RS11895 are separated by 167 nucleotidesHMPREF1078_RS11895 and HMPREF1078_RS11900 are separated by 20 nucleotidesHMPREF1078_RS11900 and HMPREF1078_RS11905 are separated by 109 nucleotidesHMPREF1078_RS11905 and HMPREF1078_RS11910 are separated by 276 nucleotidesHMPREF1078_RS11910 and HMPREF1078_RS11915 are separated by 14 nucleotidesHMPREF1078_RS11915 and HMPREF1078_RS11920 are separated by 141 nucleotides HMPREF1078_RS11865: HMPREF1078_RS11865 - RagB/SusD family nutrient uptake outer membrane protein, at 318,830 to 320,380 _RS11865 HMPREF1078_RS11870: HMPREF1078_RS11870 - TonB-dependent receptor, at 320,394 to 323,684 _RS11870 HMPREF1078_RS11875: HMPREF1078_RS11875 - FecR domain-containing protein, at 323,941 to 324,888 _RS11875 HMPREF1078_RS11885: HMPREF1078_RS11885 - sigma-70 family RNA polymerase sigma factor, at 325,753 to 326,337 _RS11885 HMPREF1078_RS11890: HMPREF1078_RS11890 - FecR domain-containing protein, at 326,418 to 327,629 _RS11890 HMPREF1078_RS11895: HMPREF1078_RS11895 - TonB-dependent receptor, at 327,797 to 331,111 _RS11895 HMPREF1078_RS11900: HMPREF1078_RS11900 - RagB/SusD family nutrient uptake outer membrane protein, at 331,132 to 332,604 _RS11900 HMPREF1078_RS11905: HMPREF1078_RS11905 - glycoside hydrolase family 2, at 332,714 to 335,482 _RS11905 HMPREF1078_RS11910: HMPREF1078_RS11910 - TonB-dependent receptor, at 335,759 to 338,959 _RS11910 HMPREF1078_RS11915: HMPREF1078_RS11915 - RagB/SusD family nutrient uptake outer membrane protein, at 338,974 to 340,458 _RS11915 HMPREF1078_RS11920: HMPREF1078_RS11920 - GH92 family glycosyl hydrolase, at 340,600 to 342,885 _RS11920
Locus Name Description Strand Phenotype
HMPREF1078_RS11865 HMPREF1078_RS11865 RagB/SusD family nutrient uptake outer membrane protein - cofit
HMPREF1078_RS11870 HMPREF1078_RS11870 TonB-dependent receptor - cofit
HMPREF1078_RS11875 HMPREF1078_RS11875 FecR domain-containing protein - insig.
HMPREF1078_RS11885 HMPREF1078_RS11885 sigma-70 family RNA polymerase sigma factor + insig.
HMPREF1078_RS11890 HMPREF1078_RS11890 FecR domain-containing protein + insig.
HMPREF1078_RS11895 HMPREF1078_RS11895 TonB-dependent receptor + cofit
HMPREF1078_RS11900 HMPREF1078_RS11900 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1078_RS11905 HMPREF1078_RS11905 glycoside hydrolase family 2 + insig.
HMPREF1078_RS11910 HMPREF1078_RS11910 TonB-dependent receptor + insig.
HMPREF1078_RS11915 HMPREF1078_RS11915 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1078_RS11920 HMPREF1078_RS11920 GH92 family glycosyl hydrolase + insig.

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