Gene info for HMPREF1078_RS11845 in Parabacteroides merdae CL09T00C40

Annotation: cysteine desulfurase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, - strand, nucleotides 311,233 to 312,447
See nucleotide sequence around HMPREF1078_RS11845 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS11820 and HMPREF1078_RS11825 are separated by 14 nucleotidesHMPREF1078_RS11825 and HMPREF1078_RS11830 are separated by 632 nucleotidesHMPREF1078_RS11830 and HMPREF1078_RS11835 are separated by 8 nucleotidesHMPREF1078_RS11835 and HMPREF1078_RS11840 are separated by 81 nucleotidesHMPREF1078_RS11840 and HMPREF1078_RS11845 are separated by 23 nucleotidesHMPREF1078_RS11845 and HMPREF1078_RS18790 are separated by 168 nucleotidesHMPREF1078_RS18790 and HMPREF1078_RS11850 overlap by 63 nucleotidesHMPREF1078_RS11850 and HMPREF1078_RS11855 are separated by 157 nucleotidesHMPREF1078_RS11855 and HMPREF1078_RS11860 are separated by 328 nucleotidesHMPREF1078_RS11860 and HMPREF1078_RS11865 are separated by 137 nucleotides HMPREF1078_RS11820: HMPREF1078_RS11820 - M28 family peptidase, at 306,890 to 307,888 _RS11820 HMPREF1078_RS11825: HMPREF1078_RS11825 - SufE family protein, at 307,903 to 308,331 _RS11825 HMPREF1078_RS11830: HMPREF1078_RS11830 - 6-bladed beta-propeller, at 308,964 to 310,115 _RS11830 HMPREF1078_RS11835: HMPREF1078_RS11835 - ribonuclease HII, at 310,124 to 310,723 _RS11835 HMPREF1078_RS11840: HMPREF1078_RS11840 - VanZ family protein, at 310,805 to 311,209 _RS11840 HMPREF1078_RS11845: HMPREF1078_RS11845 - cysteine desulfurase, at 311,233 to 312,447 _RS11845 HMPREF1078_RS18790: HMPREF1078_RS18790 - DUF86 domain-containing protein, at 312,616 to 312,816 _RS18790 HMPREF1078_RS11850: HMPREF1078_RS11850 - glycoside hydrolase family 16 protein, at 312,754 to 313,494 _RS11850 HMPREF1078_RS11855: HMPREF1078_RS11855 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 313,652 to 316,312 _RS11855 HMPREF1078_RS11860: HMPREF1078_RS11860 - family 20 glycosylhydrolase, at 316,641 to 318,692 _RS11860 HMPREF1078_RS11865: HMPREF1078_RS11865 - RagB/SusD family nutrient uptake outer membrane protein, at 318,830 to 320,380 _RS11865
Locus Name Description Strand Phenotype
HMPREF1078_RS11820 HMPREF1078_RS11820 M28 family peptidase + strong
HMPREF1078_RS11825 HMPREF1078_RS11825 SufE family protein + no data
HMPREF1078_RS11830 HMPREF1078_RS11830 6-bladed beta-propeller + insig.
HMPREF1078_RS11835 HMPREF1078_RS11835 ribonuclease HII - insig.
HMPREF1078_RS11840 HMPREF1078_RS11840 VanZ family protein - strong
HMPREF1078_RS11845 HMPREF1078_RS11845 cysteine desulfurase - no data
HMPREF1078_RS18790 HMPREF1078_RS18790 DUF86 domain-containing protein + insig.
HMPREF1078_RS11850 HMPREF1078_RS11850 glycoside hydrolase family 16 protein - insig.
HMPREF1078_RS11855 HMPREF1078_RS11855 glycoside hydrolase family 2 TIM barrel-domain containing protein - insig.
HMPREF1078_RS11860 HMPREF1078_RS11860 family 20 glycosylhydrolase - cofit
HMPREF1078_RS11865 HMPREF1078_RS11865 RagB/SusD family nutrient uptake outer membrane protein - cofit

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