Gene info for HMPREF1078_RS11630 in Parabacteroides merdae CL09T00C40

Annotation: HU family DNA-binding protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, + strand, nucleotides 267,769 to 268,041
See nucleotide sequence around HMPREF1078_RS11630 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS11605 and HMPREF1078_RS11610 are separated by 1 nucleotidesHMPREF1078_RS11610 and HMPREF1078_RS11615 are separated by 85 nucleotidesHMPREF1078_RS11615 and HMPREF1078_RS11620 overlap by 4 nucleotidesHMPREF1078_RS11620 and HMPREF1078_RS11625 overlap by 20 nucleotidesHMPREF1078_RS11625 and HMPREF1078_RS11630 are separated by 186 nucleotidesHMPREF1078_RS11630 and HMPREF1078_RS11635 are separated by 185 nucleotidesHMPREF1078_RS11635 and HMPREF1078_RS11640 are separated by 753 nucleotidesHMPREF1078_RS11640 and HMPREF1078_RS11645 are separated by 149 nucleotidesHMPREF1078_RS11645 and HMPREF1078_RS11650 are separated by 68 nucleotidesHMPREF1078_RS11650 and HMPREF1078_RS11655 are separated by 74 nucleotides HMPREF1078_RS11605: HMPREF1078_RS11605 - DUF4468 domain-containing protein, at 263,252 to 264,253 _RS11605 HMPREF1078_RS11610: HMPREF1078_RS11610 - DUF4468 domain-containing protein, at 264,255 to 264,809 _RS11610 HMPREF1078_RS11615: HMPREF1078_RS11615 - endonuclease/exonuclease/phosphatase family protein, at 264,895 to 266,016 _RS11615 HMPREF1078_RS11620: HMPREF1078_RS11620 - rhomboid family intramembrane serine protease, at 266,013 to 266,891 _RS11620 HMPREF1078_RS11625: HMPREF1078_RS11625 - rhomboid family intramembrane serine protease, at 266,872 to 267,582 _RS11625 HMPREF1078_RS11630: HMPREF1078_RS11630 - HU family DNA-binding protein, at 267,769 to 268,041 _RS11630 HMPREF1078_RS11635: HMPREF1078_RS11635 - arginine--tRNA ligase, at 268,227 to 270,020 _RS11635 HMPREF1078_RS11640: HMPREF1078_RS11640 - type I DNA topoisomerase, at 270,774 to 273,119 _RS11640 HMPREF1078_RS11645: HMPREF1078_RS11645 - tetratricopeptide repeat protein, at 273,269 to 273,532 _RS11645 HMPREF1078_RS11650: HMPREF1078_RS11650 - glucosamine-6-phosphate deaminase, at 273,601 to 274,413 _RS11650 HMPREF1078_RS11655: HMPREF1078_RS11655 - FprA family A-type flavoprotein, at 274,488 to 275,684 _RS11655
Locus Name Description Strand Phenotype
HMPREF1078_RS11605 HMPREF1078_RS11605 DUF4468 domain-containing protein + insig.
HMPREF1078_RS11610 HMPREF1078_RS11610 DUF4468 domain-containing protein + insig.
HMPREF1078_RS11615 HMPREF1078_RS11615 endonuclease/exonuclease/phosphatase family protein - strong
HMPREF1078_RS11620 HMPREF1078_RS11620 rhomboid family intramembrane serine protease - strong
HMPREF1078_RS11625 HMPREF1078_RS11625 rhomboid family intramembrane serine protease - sig.
HMPREF1078_RS11630 HMPREF1078_RS11630 HU family DNA-binding protein + insig.
HMPREF1078_RS11635 HMPREF1078_RS11635 arginine--tRNA ligase + no data
HMPREF1078_RS11640 HMPREF1078_RS11640 type I DNA topoisomerase - no data
HMPREF1078_RS11645 HMPREF1078_RS11645 tetratricopeptide repeat protein + insig.
HMPREF1078_RS11650 HMPREF1078_RS11650 glucosamine-6-phosphate deaminase - no data
HMPREF1078_RS11655 HMPREF1078_RS11655 FprA family A-type flavoprotein - strong

Or browse nearby genes

Or see the comparative fitness browser