Gene info for HMPREF1078_RS11580 in Parabacteroides merdae CL09T00C40

Annotation: cyclodeaminase/cyclohydrolase family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, - strand, nucleotides 255,061 to 255,696
See nucleotide sequence around HMPREF1078_RS11580 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS11555 and HMPREF1078_RS11560 are separated by 135 nucleotidesHMPREF1078_RS11560 and HMPREF1078_RS11565 are separated by 123 nucleotidesHMPREF1078_RS11565 and HMPREF1078_RS11570 are separated by 31 nucleotidesHMPREF1078_RS11570 and HMPREF1078_RS11575 are separated by 130 nucleotidesHMPREF1078_RS11575 and HMPREF1078_RS11580 are separated by 5 nucleotidesHMPREF1078_RS11580 and HMPREF1078_RS11585 are separated by 41 nucleotidesHMPREF1078_RS11585 and HMPREF1078_RS11590 are separated by 3 nucleotidesHMPREF1078_RS11590 and HMPREF1078_RS11595 overlap by 4 nucleotidesHMPREF1078_RS11595 and HMPREF1078_RS11600 are separated by 175 nucleotidesHMPREF1078_RS11600 and HMPREF1078_RS11605 are separated by 164 nucleotides HMPREF1078_RS11555: HMPREF1078_RS11555 - tRNA-Asn, at 251,129 to 251,202 _RS11555 HMPREF1078_RS11560: HMPREF1078_RS11560 - tRNA-Asn, at 251,338 to 251,411 _RS11560 HMPREF1078_RS11565: HMPREF1078_RS11565 - tRNA (guanosine(46)-N7)-methyltransferase TrmB, at 251,535 to 252,293 _RS11565 HMPREF1078_RS11570: HMPREF1078_RS11570 - Mrp/NBP35 family ATP-binding protein, at 252,325 to 253,434 _RS11570 HMPREF1078_RS11575: HMPREF1078_RS11575 - histidine ammonia-lyase, at 253,565 to 255,055 _RS11575 HMPREF1078_RS11580: HMPREF1078_RS11580 - cyclodeaminase/cyclohydrolase family protein, at 255,061 to 255,696 _RS11580 HMPREF1078_RS11585: HMPREF1078_RS11585 - imidazolonepropionase, at 255,738 to 256,988 _RS11585 HMPREF1078_RS11590: HMPREF1078_RS11590 - glutamate formimidoyltransferase, at 256,992 to 257,897 _RS11590 HMPREF1078_RS11595: HMPREF1078_RS11595 - urocanate hydratase, at 257,894 to 259,897 _RS11595 HMPREF1078_RS11600: HMPREF1078_RS11600 - protein translocase subunit SecDF, at 260,073 to 263,087 _RS11600 HMPREF1078_RS11605: HMPREF1078_RS11605 - DUF4468 domain-containing protein, at 263,252 to 264,253 _RS11605
Locus Name Description Strand Phenotype
HMPREF1078_RS11555 HMPREF1078_RS11555 tRNA-Asn + insig.
HMPREF1078_RS11560 HMPREF1078_RS11560 tRNA-Asn + no data
HMPREF1078_RS11565 HMPREF1078_RS11565 tRNA (guanosine(46)-N7)-methyltransferase TrmB + strong
HMPREF1078_RS11570 HMPREF1078_RS11570 Mrp/NBP35 family ATP-binding protein + no data
HMPREF1078_RS11575 HMPREF1078_RS11575 histidine ammonia-lyase - cofit
HMPREF1078_RS11580 HMPREF1078_RS11580 cyclodeaminase/cyclohydrolase family protein - insig.
HMPREF1078_RS11585 HMPREF1078_RS11585 imidazolonepropionase - insig.
HMPREF1078_RS11590 HMPREF1078_RS11590 glutamate formimidoyltransferase - sig.
HMPREF1078_RS11595 HMPREF1078_RS11595 urocanate hydratase - cofit
HMPREF1078_RS11600 HMPREF1078_RS11600 protein translocase subunit SecDF - no data
HMPREF1078_RS11605 HMPREF1078_RS11605 DUF4468 domain-containing protein + insig.

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