Gene info for HMPREF1078_RS11475 in Parabacteroides merdae CL09T00C40

Annotation: glycoside hydrolase family 2 TIM barrel-domain containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, - strand, nucleotides 226,273 to 228,309
See nucleotide sequence around HMPREF1078_RS11475 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS11450 and HMPREF1078_RS11455 are separated by 1228 nucleotidesHMPREF1078_RS11455 and HMPREF1078_RS11460 are separated by 34 nucleotidesHMPREF1078_RS11460 and HMPREF1078_RS11465 are separated by 97 nucleotidesHMPREF1078_RS11465 and HMPREF1078_RS11470 overlap by 11 nucleotidesHMPREF1078_RS11470 and HMPREF1078_RS11475 are separated by 102 nucleotidesHMPREF1078_RS11475 and HMPREF1078_RS11480 are separated by 186 nucleotidesHMPREF1078_RS11480 and HMPREF1078_RS11485 are separated by 182 nucleotidesHMPREF1078_RS11485 and HMPREF1078_RS11490 are separated by 1017 nucleotidesHMPREF1078_RS11490 and HMPREF1078_RS11495 are separated by 130 nucleotidesHMPREF1078_RS11495 and HMPREF1078_RS11500 are separated by 261 nucleotides HMPREF1078_RS11450: HMPREF1078_RS11450 - heparinase II/III-family protein, at 214,986 to 216,914 _RS11450 HMPREF1078_RS11455: HMPREF1078_RS11455 - TonB-dependent receptor, at 218,143 to 221,346 _RS11455 HMPREF1078_RS11460: HMPREF1078_RS11460 - RagB/SusD family nutrient uptake outer membrane protein, at 221,381 to 223,096 _RS11460 HMPREF1078_RS11465: HMPREF1078_RS11465 - sulfatase, at 223,194 to 224,630 _RS11465 HMPREF1078_RS11470: HMPREF1078_RS11470 - sulfatase, at 224,620 to 226,170 _RS11470 HMPREF1078_RS11475: HMPREF1078_RS11475 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 226,273 to 228,309 _RS11475 HMPREF1078_RS11480: HMPREF1078_RS11480 - TonB-dependent receptor, at 228,496 to 231,063 _RS11480 HMPREF1078_RS11485: HMPREF1078_RS11485 - SagB/ThcOx family dehydrogenase, at 231,246 to 231,881 _RS11485 HMPREF1078_RS11490: HMPREF1078_RS11490 - RNA polymerase sigma-70 factor, at 232,899 to 233,474 _RS11490 HMPREF1078_RS11495: HMPREF1078_RS11495 - FecR domain-containing protein, at 233,605 to 234,531 _RS11495 HMPREF1078_RS11500: HMPREF1078_RS11500 - TonB-dependent receptor, at 234,793 to 237,990 _RS11500
Locus Name Description Strand Phenotype
HMPREF1078_RS11450 HMPREF1078_RS11450 heparinase II/III-family protein - insig.
HMPREF1078_RS11455 HMPREF1078_RS11455 TonB-dependent receptor + insig.
HMPREF1078_RS11460 HMPREF1078_RS11460 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1078_RS11465 HMPREF1078_RS11465 sulfatase + insig.
HMPREF1078_RS11470 HMPREF1078_RS11470 sulfatase + insig.
HMPREF1078_RS11475 HMPREF1078_RS11475 glycoside hydrolase family 2 TIM barrel-domain containing protein - insig.
HMPREF1078_RS11480 HMPREF1078_RS11480 TonB-dependent receptor - cofit
HMPREF1078_RS11485 HMPREF1078_RS11485 SagB/ThcOx family dehydrogenase + insig.
HMPREF1078_RS11490 HMPREF1078_RS11490 RNA polymerase sigma-70 factor + insig.
HMPREF1078_RS11495 HMPREF1078_RS11495 FecR domain-containing protein + insig.
HMPREF1078_RS11500 HMPREF1078_RS11500 TonB-dependent receptor + insig.

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