Gene info for HMPREF1078_RS11420 in Parabacteroides merdae CL09T00C40

Annotation: MATE family efflux transporter
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, - strand, nucleotides 205,004 to 206,356
See nucleotide sequence around HMPREF1078_RS11420 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS11395 and HMPREF1078_RS11400 are separated by 317 nucleotidesHMPREF1078_RS11400 and HMPREF1078_RS11405 are separated by 18 nucleotidesHMPREF1078_RS11405 and HMPREF1078_RS11410 are separated by 95 nucleotidesHMPREF1078_RS11410 and HMPREF1078_RS11415 are separated by 109 nucleotidesHMPREF1078_RS11415 and HMPREF1078_RS11420 are separated by 72 nucleotidesHMPREF1078_RS11420 and HMPREF1078_RS11425 are separated by 56 nucleotidesHMPREF1078_RS11425 and HMPREF1078_RS11430 are separated by 7 nucleotidesHMPREF1078_RS11430 and HMPREF1078_RS11435 are separated by 84 nucleotidesHMPREF1078_RS11435 and HMPREF1078_RS11440 overlap by 8 nucleotidesHMPREF1078_RS11440 and HMPREF1078_RS19390 are separated by 20 nucleotides HMPREF1078_RS11395: HMPREF1078_RS11395 - RagB/SusD family nutrient uptake outer membrane protein, at 199,158 to 201,167 _RS11395 HMPREF1078_RS11400: HMPREF1078_RS11400 - NADPH-dependent glutamate synthase, at 201,485 to 202,954 _RS11400 HMPREF1078_RS11405: HMPREF1078_RS11405 - sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein, at 202,973 to 203,770 _RS11405 HMPREF1078_RS11410: HMPREF1078_RS11410 - co-chaperone GroES family protein, at 203,866 to 204,249 _RS11410 HMPREF1078_RS11415: HMPREF1078_RS11415 - DUF4251 domain-containing protein, at 204,359 to 204,931 _RS11415 HMPREF1078_RS11420: HMPREF1078_RS11420 - MATE family efflux transporter, at 205,004 to 206,356 _RS11420 HMPREF1078_RS11425: HMPREF1078_RS11425 - ABC transporter ATP-binding protein, at 206,413 to 207,456 _RS11425 HMPREF1078_RS11430: HMPREF1078_RS11430 - iron ABC transporter permease, at 207,464 to 208,498 _RS11430 HMPREF1078_RS11435: HMPREF1078_RS11435 - two-component regulator propeller domain-containing protein, at 208,583 to 212,614 _RS11435 HMPREF1078_RS11440: HMPREF1078_RS11440 - alkaline phosphatase, at 212,607 to 213,506 _RS11440 HMPREF1078_RS19390: HMPREF1078_RS19390 - hypothetical protein, at 213,527 to 213,694 _RS19390
Locus Name Description Strand Phenotype
HMPREF1078_RS11395 HMPREF1078_RS11395 RagB/SusD family nutrient uptake outer membrane protein + cofit
HMPREF1078_RS11400 HMPREF1078_RS11400 NADPH-dependent glutamate synthase - strong
HMPREF1078_RS11405 HMPREF1078_RS11405 sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein - cofit
HMPREF1078_RS11410 HMPREF1078_RS11410 co-chaperone GroES family protein - insig.
HMPREF1078_RS11415 HMPREF1078_RS11415 DUF4251 domain-containing protein - insig.
HMPREF1078_RS11420 HMPREF1078_RS11420 MATE family efflux transporter - insig.
HMPREF1078_RS11425 HMPREF1078_RS11425 ABC transporter ATP-binding protein - sig.
HMPREF1078_RS11430 HMPREF1078_RS11430 iron ABC transporter permease - strong
HMPREF1078_RS11435 HMPREF1078_RS11435 two-component regulator propeller domain-containing protein + insig.
HMPREF1078_RS11440 HMPREF1078_RS11440 alkaline phosphatase - insig.
HMPREF1078_RS19390 HMPREF1078_RS19390 hypothetical protein - insig.

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