Gene info for HMPREF1078_RS11395 in Parabacteroides merdae CL09T00C40

Annotation: RagB/SusD family nutrient uptake outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, + strand, nucleotides 199,158 to 201,167
See nucleotide sequence around HMPREF1078_RS11395 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS11360 and HMPREF1078_RS11365 are separated by 265 nucleotidesHMPREF1078_RS11365 and HMPREF1078_RS11375 are separated by 379 nucleotidesHMPREF1078_RS11375 and HMPREF1078_RS11380 are separated by 344 nucleotidesHMPREF1078_RS11380 and HMPREF1078_RS11390 are separated by 1135 nucleotidesHMPREF1078_RS11390 and HMPREF1078_RS11395 are separated by 19 nucleotidesHMPREF1078_RS11395 and HMPREF1078_RS11400 are separated by 317 nucleotidesHMPREF1078_RS11400 and HMPREF1078_RS11405 are separated by 18 nucleotidesHMPREF1078_RS11405 and HMPREF1078_RS11410 are separated by 95 nucleotidesHMPREF1078_RS11410 and HMPREF1078_RS11415 are separated by 109 nucleotidesHMPREF1078_RS11415 and HMPREF1078_RS11420 are separated by 72 nucleotides HMPREF1078_RS11360: HMPREF1078_RS11360 - JAB domain-containing protein, at 191,798 to 192,250 _RS11360 HMPREF1078_RS11365: HMPREF1078_RS11365 - tyrosine-type recombinase/integrase, at 192,516 to 193,103 _RS11365 HMPREF1078_RS11375: HMPREF1078_RS11375 - DUF4595 domain-containing protein, at 193,483 to 194,391 _RS11375 HMPREF1078_RS11380: HMPREF1078_RS11380 - tRNA-Gly, at 194,736 to 194,808 _RS11380 HMPREF1078_RS11390: HMPREF1078_RS11390 - TonB-dependent receptor, at 195,944 to 199,138 _RS11390 HMPREF1078_RS11395: HMPREF1078_RS11395 - RagB/SusD family nutrient uptake outer membrane protein, at 199,158 to 201,167 _RS11395 HMPREF1078_RS11400: HMPREF1078_RS11400 - NADPH-dependent glutamate synthase, at 201,485 to 202,954 _RS11400 HMPREF1078_RS11405: HMPREF1078_RS11405 - sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein, at 202,973 to 203,770 _RS11405 HMPREF1078_RS11410: HMPREF1078_RS11410 - co-chaperone GroES family protein, at 203,866 to 204,249 _RS11410 HMPREF1078_RS11415: HMPREF1078_RS11415 - DUF4251 domain-containing protein, at 204,359 to 204,931 _RS11415 HMPREF1078_RS11420: HMPREF1078_RS11420 - MATE family efflux transporter, at 205,004 to 206,356 _RS11420
Locus Name Description Strand Phenotype
HMPREF1078_RS11360 HMPREF1078_RS11360 JAB domain-containing protein + insig.
HMPREF1078_RS11365 HMPREF1078_RS11365 tyrosine-type recombinase/integrase + insig.
HMPREF1078_RS11375 HMPREF1078_RS11375 DUF4595 domain-containing protein + insig.
HMPREF1078_RS11380 HMPREF1078_RS11380 tRNA-Gly + no data
HMPREF1078_RS11390 HMPREF1078_RS11390 TonB-dependent receptor + insig.
HMPREF1078_RS11395 HMPREF1078_RS11395 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1078_RS11400 HMPREF1078_RS11400 NADPH-dependent glutamate synthase - strong
HMPREF1078_RS11405 HMPREF1078_RS11405 sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein - cofit
HMPREF1078_RS11410 HMPREF1078_RS11410 co-chaperone GroES family protein - insig.
HMPREF1078_RS11415 HMPREF1078_RS11415 DUF4251 domain-containing protein - insig.
HMPREF1078_RS11420 HMPREF1078_RS11420 MATE family efflux transporter - insig.

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