Gene info for HMPREF1078_RS11275 in Parabacteroides merdae CL09T00C40

Annotation: DUF6089 family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, - strand, nucleotides 177,161 to 177,880
See nucleotide sequence around HMPREF1078_RS11275 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS11250 and HMPREF1078_RS11255 are separated by 153 nucleotidesHMPREF1078_RS11255 and HMPREF1078_RS11260 are separated by 72 nucleotidesHMPREF1078_RS11260 and HMPREF1078_RS11265 are separated by 208 nucleotidesHMPREF1078_RS11265 and HMPREF1078_RS11270 are separated by 14 nucleotidesHMPREF1078_RS11270 and HMPREF1078_RS11275 are separated by 17 nucleotidesHMPREF1078_RS11275 and HMPREF1078_RS11280 are separated by 87 nucleotidesHMPREF1078_RS11280 and HMPREF1078_RS11285 are separated by 71 nucleotidesHMPREF1078_RS11285 and HMPREF1078_RS11290 are separated by 179 nucleotidesHMPREF1078_RS11290 and HMPREF1078_RS11295 overlap by 4 nucleotidesHMPREF1078_RS11295 and HMPREF1078_RS11300 overlap by 26 nucleotides HMPREF1078_RS11250: HMPREF1078_RS11250 - glutamate racemase, at 171,414 to 172,250 _RS11250 HMPREF1078_RS11255: HMPREF1078_RS11255 - OmpH family outer membrane protein, at 172,404 to 172,901 _RS11255 HMPREF1078_RS11260: HMPREF1078_RS11260 - OmpH family outer membrane protein, at 172,974 to 173,489 _RS11260 HMPREF1078_RS11265: HMPREF1078_RS11265 - outer membrane protein assembly factor BamA, at 173,698 to 176,385 _RS11265 HMPREF1078_RS11270: HMPREF1078_RS11270 - isoprenyl transferase, at 176,400 to 177,143 _RS11270 HMPREF1078_RS11275: HMPREF1078_RS11275 - DUF6089 family protein, at 177,161 to 177,880 _RS11275 HMPREF1078_RS11280: HMPREF1078_RS11280 - DUF6242 domain-containing protein, at 177,968 to 179,395 _RS11280 HMPREF1078_RS11285: HMPREF1078_RS11285 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD, at 179,467 to 180,510 _RS11285 HMPREF1078_RS11290: HMPREF1078_RS11290 - peptide chain release factor N(5)-glutamine methyltransferase, at 180,690 to 181,538 _RS11290 HMPREF1078_RS11295: HMPREF1078_RS11295 - regulatory protein RecX, at 181,535 to 182,026 _RS11295 HMPREF1078_RS11300: HMPREF1078_RS11300 - phosphoribosyltransferase family protein, at 182,001 to 182,693 _RS11300
Locus Name Description Strand Phenotype
HMPREF1078_RS11250 HMPREF1078_RS11250 glutamate racemase - no data
HMPREF1078_RS11255 HMPREF1078_RS11255 OmpH family outer membrane protein - no data
HMPREF1078_RS11260 HMPREF1078_RS11260 OmpH family outer membrane protein - strong
HMPREF1078_RS11265 HMPREF1078_RS11265 outer membrane protein assembly factor BamA - no data
HMPREF1078_RS11270 HMPREF1078_RS11270 isoprenyl transferase - no data
HMPREF1078_RS11275 HMPREF1078_RS11275 DUF6089 family protein - cofit
HMPREF1078_RS11280 HMPREF1078_RS11280 DUF6242 domain-containing protein - insig.
HMPREF1078_RS11285 HMPREF1078_RS11285 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD - no data
HMPREF1078_RS11290 HMPREF1078_RS11290 peptide chain release factor N(5)-glutamine methyltransferase + sig.
HMPREF1078_RS11295 HMPREF1078_RS11295 regulatory protein RecX + sig.
HMPREF1078_RS11300 HMPREF1078_RS11300 phosphoribosyltransferase family protein + insig.

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