Gene info for HMPREF1078_RS11190 in Parabacteroides merdae CL09T00C40

Annotation: DoxX family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, - strand, nucleotides 158,385 to 158,825
See nucleotide sequence around HMPREF1078_RS11190 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS11165 and HMPREF1078_RS11170 are separated by 61 nucleotidesHMPREF1078_RS11170 and HMPREF1078_RS11175 are separated by 169 nucleotidesHMPREF1078_RS11175 and HMPREF1078_RS11180 are separated by 148 nucleotidesHMPREF1078_RS11180 and HMPREF1078_RS11185 are separated by 26 nucleotidesHMPREF1078_RS11185 and HMPREF1078_RS11190 are separated by 182 nucleotidesHMPREF1078_RS11190 and HMPREF1078_RS11195 are separated by 111 nucleotidesHMPREF1078_RS11195 and HMPREF1078_RS11200 are separated by 197 nucleotidesHMPREF1078_RS11200 and HMPREF1078_RS11205 are separated by 115 nucleotidesHMPREF1078_RS11205 and HMPREF1078_RS11210 are separated by 20 nucleotidesHMPREF1078_RS11210 and HMPREF1078_RS11215 are separated by 65 nucleotides HMPREF1078_RS11165: HMPREF1078_RS11165 - pseudouridine synthase, at 154,772 to 156,229 _RS11165 HMPREF1078_RS11170: HMPREF1078_RS11170 - adenylosuccinate lyase, at 156,291 to 157,634 _RS11170 HMPREF1078_RS11175: HMPREF1078_RS11175 - tRNA-Val, at 157,804 to 157,878 _RS11175 HMPREF1078_RS11180: HMPREF1078_RS11180 - tRNA-Val, at 158,027 to 158,101 _RS11180 HMPREF1078_RS11185: HMPREF1078_RS11185 - tRNA-Val, at 158,128 to 158,202 _RS11185 HMPREF1078_RS11190: HMPREF1078_RS11190 - DoxX family protein, at 158,385 to 158,825 _RS11190 HMPREF1078_RS11195: HMPREF1078_RS11195 - tRNA-Arg, at 158,937 to 159,010 _RS11195 HMPREF1078_RS11200: HMPREF1078_RS11200 - aspartate--ammonia ligase, at 159,208 to 160,245 _RS11200 HMPREF1078_RS11205: HMPREF1078_RS11205 - uracil-DNA glycosylase, at 160,361 to 161,023 _RS11205 HMPREF1078_RS11210: HMPREF1078_RS11210 - putative LPS assembly protein LptD, at 161,044 to 163,809 _RS11210 HMPREF1078_RS11215: HMPREF1078_RS11215 - HDIG domain-containing protein, at 163,875 to 164,417 _RS11215
Locus Name Description Strand Phenotype
HMPREF1078_RS11165 HMPREF1078_RS11165 pseudouridine synthase - no data
HMPREF1078_RS11170 HMPREF1078_RS11170 adenylosuccinate lyase - no data
HMPREF1078_RS11175 HMPREF1078_RS11175 tRNA-Val + no data
HMPREF1078_RS11180 HMPREF1078_RS11180 tRNA-Val + no data
HMPREF1078_RS11185 HMPREF1078_RS11185 tRNA-Val + no data
HMPREF1078_RS11190 HMPREF1078_RS11190 DoxX family protein - insig.
HMPREF1078_RS11195 HMPREF1078_RS11195 tRNA-Arg - no data
HMPREF1078_RS11200 HMPREF1078_RS11200 aspartate--ammonia ligase + strong
HMPREF1078_RS11205 HMPREF1078_RS11205 uracil-DNA glycosylase + sig.
HMPREF1078_RS11210 HMPREF1078_RS11210 putative LPS assembly protein LptD - no data
HMPREF1078_RS11215 HMPREF1078_RS11215 HDIG domain-containing protein - strong

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