Gene info for HMPREF1078_RS10900 in Parabacteroides merdae CL09T00C40

Annotation: tRNA 2-thiouridine(34) synthase MnmA
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, + strand, nucleotides 86,724 to 87,800
See nucleotide sequence around HMPREF1078_RS10900 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS10880 and HMPREF1078_RS10885 overlap by 4 nucleotidesHMPREF1078_RS10885 and HMPREF1078_RS10890 are separated by 82 nucleotidesHMPREF1078_RS10890 and HMPREF1078_RS10895 are separated by 97 nucleotidesHMPREF1078_RS10895 and HMPREF1078_RS19895 are separated by 155 nucleotidesHMPREF1078_RS19895 and HMPREF1078_RS10900 are separated by 67 nucleotidesHMPREF1078_RS10900 and HMPREF1078_RS10905 are separated by 354 nucleotidesHMPREF1078_RS10905 and HMPREF1078_RS10910 are separated by 160 nucleotidesHMPREF1078_RS10910 and HMPREF1078_RS10915 are separated by 58 nucleotidesHMPREF1078_RS10915 and HMPREF1078_RS10920 are separated by 180 nucleotidesHMPREF1078_RS10920 and HMPREF1078_RS10925 are separated by 465 nucleotides HMPREF1078_RS10880: HMPREF1078_RS10880 - ribosome-associated translation inhibitor RaiA, at 83,780 to 84,079 _RS10880 HMPREF1078_RS10885: HMPREF1078_RS10885 - tyrosine recombinase XerC, at 84,076 to 84,978 _RS10885 HMPREF1078_RS10890: HMPREF1078_RS10890 - 30S ribosomal protein S21, at 85,061 to 85,252 _RS10890 HMPREF1078_RS10895: HMPREF1078_RS10895 - S-methyl-5-thioribose-1-phosphate isomerase, at 85,350 to 86,399 _RS10895 HMPREF1078_RS19895: HMPREF1078_RS19895 - SGNH/GDSL hydrolase family protein, at 86,555 to 86,656 _RS19895 HMPREF1078_RS10900: HMPREF1078_RS10900 - tRNA 2-thiouridine(34) synthase MnmA, at 86,724 to 87,800 _RS10900 HMPREF1078_RS10905: HMPREF1078_RS10905 - ribose-phosphate pyrophosphokinase, at 88,155 to 89,096 _RS10905 HMPREF1078_RS10910: HMPREF1078_RS10910 - alpha-amylase family protein, at 89,257 to 90,948 _RS10910 HMPREF1078_RS10915: HMPREF1078_RS10915 - patatin-like phospholipase family protein, at 91,007 to 91,846 _RS10915 HMPREF1078_RS10920: HMPREF1078_RS10920 - sodium-translocating pyrophosphatase, at 92,027 to 94,231 _RS10920 HMPREF1078_RS10925: HMPREF1078_RS10925 - glutamine synthetase III, at 94,697 to 96,889 _RS10925
Locus Name Description Strand Phenotype
HMPREF1078_RS10880 HMPREF1078_RS10880 ribosome-associated translation inhibitor RaiA - sig.
HMPREF1078_RS10885 HMPREF1078_RS10885 tyrosine recombinase XerC - sig.
HMPREF1078_RS10890 HMPREF1078_RS10890 30S ribosomal protein S21 - no data
HMPREF1078_RS10895 HMPREF1078_RS10895 S-methyl-5-thioribose-1-phosphate isomerase - insig.
HMPREF1078_RS19895 HMPREF1078_RS19895 SGNH/GDSL hydrolase family protein - insig.
HMPREF1078_RS10900 HMPREF1078_RS10900 tRNA 2-thiouridine(34) synthase MnmA + no data
HMPREF1078_RS10905 HMPREF1078_RS10905 ribose-phosphate pyrophosphokinase - no data
HMPREF1078_RS10910 HMPREF1078_RS10910 alpha-amylase family protein - insig.
HMPREF1078_RS10915 HMPREF1078_RS10915 patatin-like phospholipase family protein - insig.
HMPREF1078_RS10920 HMPREF1078_RS10920 sodium-translocating pyrophosphatase + insig.
HMPREF1078_RS10925 HMPREF1078_RS10925 glutamine synthetase III + insig.

Or browse nearby genes

Or see the comparative fitness browser