Gene info for HMPREF1078_RS10640 in Parabacteroides merdae CL09T00C40

Annotation: XRE family transcriptional regulator
Type 1: Protein-coding gene
Located on scaffold NZ_JH976527, + strand, nucleotides 31,252 to 31,806
See nucleotide sequence around HMPREF1078_RS10640 or for all of scaffold NZ_JH976527

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS10615 and HMPREF1078_RS10620 are separated by 134 nucleotidesHMPREF1078_RS10620 and HMPREF1078_RS10625 are separated by 552 nucleotidesHMPREF1078_RS10625 and HMPREF1078_RS10630 are separated by 144 nucleotidesHMPREF1078_RS10630 and HMPREF1078_RS10635 are separated by 196 nucleotidesHMPREF1078_RS10635 and HMPREF1078_RS10640 are separated by 262 nucleotidesHMPREF1078_RS10640 and HMPREF1078_RS10645 are separated by 18 nucleotidesHMPREF1078_RS10645 and HMPREF1078_RS10650 overlap by 23 nucleotidesHMPREF1078_RS10650 and HMPREF1078_RS10655 are separated by 19 nucleotidesHMPREF1078_RS10655 and HMPREF1078_RS10660 are separated by 119 nucleotidesHMPREF1078_RS10660 and HMPREF1078_RS10665 are separated by 31 nucleotides HMPREF1078_RS10615: HMPREF1078_RS10615 - C1 family peptidase, at 24,939 to 26,156 _RS10615 HMPREF1078_RS10620: HMPREF1078_RS10620 - pyrroline-5-carboxylate reductase, at 26,291 to 27,097 _RS10620 HMPREF1078_RS10625: HMPREF1078_RS10625 - proline dehydrogenase family protein, at 27,650 to 28,828 _RS10625 HMPREF1078_RS10630: HMPREF1078_RS10630 - L-glutamate gamma-semialdehyde dehydrogenase, at 28,973 to 30,604 _RS10630 HMPREF1078_RS10635: HMPREF1078_RS10635 - ferredoxin, at 30,801 to 30,989 _RS10635 HMPREF1078_RS10640: HMPREF1078_RS10640 - XRE family transcriptional regulator, at 31,252 to 31,806 _RS10640 HMPREF1078_RS10645: HMPREF1078_RS10645 - AMP-binding protein, at 31,825 to 33,495 _RS10645 HMPREF1078_RS10650: HMPREF1078_RS10650 - glutamate 5-kinase, at 33,473 to 34,597 _RS10650 HMPREF1078_RS10655: HMPREF1078_RS10655 - glutamate-5-semialdehyde dehydrogenase, at 34,617 to 35,861 _RS10655 HMPREF1078_RS10660: HMPREF1078_RS10660 - acetylornithine carbamoyltransferase, at 35,981 to 36,946 _RS10660 HMPREF1078_RS10665: HMPREF1078_RS10665 - outer membrane beta-barrel family protein, at 36,978 to 39,077 _RS10665
Locus Name Description Strand Phenotype
HMPREF1078_RS10615 HMPREF1078_RS10615 C1 family peptidase - cofit
HMPREF1078_RS10620 HMPREF1078_RS10620 pyrroline-5-carboxylate reductase + strong
HMPREF1078_RS10625 HMPREF1078_RS10625 proline dehydrogenase family protein - insig.
HMPREF1078_RS10630 HMPREF1078_RS10630 L-glutamate gamma-semialdehyde dehydrogenase - insig.
HMPREF1078_RS10635 HMPREF1078_RS10635 ferredoxin + sig.
HMPREF1078_RS10640 HMPREF1078_RS10640 XRE family transcriptional regulator + cofit
HMPREF1078_RS10645 HMPREF1078_RS10645 AMP-binding protein + strong
HMPREF1078_RS10650 HMPREF1078_RS10650 glutamate 5-kinase + strong
HMPREF1078_RS10655 HMPREF1078_RS10655 glutamate-5-semialdehyde dehydrogenase + strong
HMPREF1078_RS10660 HMPREF1078_RS10660 acetylornithine carbamoyltransferase + strong
HMPREF1078_RS10665 HMPREF1078_RS10665 outer membrane beta-barrel family protein - insig.

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