Gene info for HMPREF1078_RS10275 in Parabacteroides merdae CL09T00C40

Annotation: biopolymer transporter ExbD
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, + strand, nucleotides 682,619 to 683,029
See nucleotide sequence around HMPREF1078_RS10275 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS10250 and HMPREF1078_RS10255 are separated by 18 nucleotidesHMPREF1078_RS10255 and HMPREF1078_RS10260 are separated by 46 nucleotidesHMPREF1078_RS10260 and HMPREF1078_RS10265 are separated by 85 nucleotidesHMPREF1078_RS10265 and HMPREF1078_RS10270 are separated by 49 nucleotidesHMPREF1078_RS10270 and HMPREF1078_RS10275 are separated by 83 nucleotidesHMPREF1078_RS10275 and HMPREF1078_RS10280 are separated by 83 nucleotidesHMPREF1078_RS10280 and HMPREF1078_RS10285 are separated by 63 nucleotidesHMPREF1078_RS10285 and HMPREF1078_RS10290 are separated by 253 nucleotidesHMPREF1078_RS10290 and HMPREF1078_RS10295 are separated by 127 nucleotidesHMPREF1078_RS10295 and HMPREF1078_RS10300 are separated by 89 nucleotides HMPREF1078_RS10250: HMPREF1078_RS10250 - HAMP domain-containing sensor histidine kinase, at 678,813 to 679,370 _RS10250 HMPREF1078_RS10255: HMPREF1078_RS10255 - NAD kinase, at 679,389 to 680,267 _RS10255 HMPREF1078_RS10260: HMPREF1078_RS10260 - CBS domain-containing protein, at 680,314 to 680,973 _RS10260 HMPREF1078_RS10265: HMPREF1078_RS10265 - pyridoxine 5'-phosphate synthase, at 681,059 to 681,775 _RS10265 HMPREF1078_RS10270: HMPREF1078_RS10270 - MotA/TolQ/ExbB proton channel family protein, at 681,825 to 682,535 _RS10270 HMPREF1078_RS10275: HMPREF1078_RS10275 - biopolymer transporter ExbD, at 682,619 to 683,029 _RS10275 HMPREF1078_RS10280: HMPREF1078_RS10280 - energy transducer TonB, at 683,113 to 683,967 _RS10280 HMPREF1078_RS10285: HMPREF1078_RS10285 - DJ-1/PfpI family protein, at 684,031 to 684,576 _RS10285 HMPREF1078_RS10290: HMPREF1078_RS10290 - DMT family transporter, at 684,830 to 685,771 _RS10290 HMPREF1078_RS10295: HMPREF1078_RS10295 - 1,4-dihydroxy-2-naphthoate polyprenyltransferase, at 685,899 to 686,798 _RS10295 HMPREF1078_RS10300: HMPREF1078_RS10300 - hypothetical protein, at 686,888 to 687,292 _RS10300
Locus Name Description Strand Phenotype
HMPREF1078_RS10250 HMPREF1078_RS10250 HAMP domain-containing sensor histidine kinase + insig.
HMPREF1078_RS10255 HMPREF1078_RS10255 NAD kinase - no data
HMPREF1078_RS10260 HMPREF1078_RS10260 CBS domain-containing protein - sig.
HMPREF1078_RS10265 HMPREF1078_RS10265 pyridoxine 5'-phosphate synthase + strong
HMPREF1078_RS10270 HMPREF1078_RS10270 MotA/TolQ/ExbB proton channel family protein + strong
HMPREF1078_RS10275 HMPREF1078_RS10275 biopolymer transporter ExbD + cofit
HMPREF1078_RS10280 HMPREF1078_RS10280 energy transducer TonB + cofit
HMPREF1078_RS10285 HMPREF1078_RS10285 DJ-1/PfpI family protein + insig.
HMPREF1078_RS10290 HMPREF1078_RS10290 DMT family transporter + insig.
HMPREF1078_RS10295 HMPREF1078_RS10295 1,4-dihydroxy-2-naphthoate polyprenyltransferase - no data
HMPREF1078_RS10300 HMPREF1078_RS10300 hypothetical protein + insig.

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