Gene info for HMPREF1078_RS10135 in Parabacteroides merdae CL09T00C40

Annotation: 16S rRNA (uracil(1498)-N(3))-methyltransferase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, - strand, nucleotides 652,382 to 653,080
See nucleotide sequence around HMPREF1078_RS10135 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS10110 and HMPREF1078_RS10115 are separated by 2 nucleotidesHMPREF1078_RS10115 and HMPREF1078_RS10120 are separated by 99 nucleotidesHMPREF1078_RS10120 and HMPREF1078_RS10125 are separated by 60 nucleotidesHMPREF1078_RS10125 and HMPREF1078_RS10130 are separated by 25 nucleotidesHMPREF1078_RS10130 and HMPREF1078_RS10135 are separated by 9 nucleotidesHMPREF1078_RS10135 and HMPREF1078_RS10140 are separated by 42 nucleotidesHMPREF1078_RS10140 and HMPREF1078_RS10145 overlap by 4 nucleotidesHMPREF1078_RS10145 and HMPREF1078_RS10150 are separated by 270 nucleotidesHMPREF1078_RS10150 and HMPREF1078_RS10155 are separated by 8 nucleotidesHMPREF1078_RS10155 and HMPREF1078_RS10160 are separated by 212 nucleotides HMPREF1078_RS10110: HMPREF1078_RS10110 - Crp/Fnr family transcriptional regulator, at 647,282 to 647,890 _RS10110 HMPREF1078_RS10115: HMPREF1078_RS10115 - hypothetical protein, at 647,893 to 648,798 _RS10115 HMPREF1078_RS10120: HMPREF1078_RS10120 - glutamine-hydrolyzing GMP synthase, at 648,898 to 650,418 _RS10120 HMPREF1078_RS10125: HMPREF1078_RS10125 - glutamine-hydrolyzing GMP synthase, at 650,479 to 651,786 _RS10125 HMPREF1078_RS10130: HMPREF1078_RS10130 - sugar O-acetyltransferase, at 651,812 to 652,372 _RS10130 HMPREF1078_RS10135: HMPREF1078_RS10135 - 16S rRNA (uracil(1498)-N(3))-methyltransferase, at 652,382 to 653,080 _RS10135 HMPREF1078_RS10140: HMPREF1078_RS10140 - nucleoside transporter C-terminal domain-containing protein, at 653,123 to 654,445 _RS10140 HMPREF1078_RS10145: HMPREF1078_RS10145 - bifunctional nuclease family protein, at 654,442 to 655,071 _RS10145 HMPREF1078_RS10150: HMPREF1078_RS10150 - M48 family metallopeptidase, at 655,342 to 656,142 _RS10150 HMPREF1078_RS10155: HMPREF1078_RS10155 - DUF5106 domain-containing protein, at 656,151 to 657,071 _RS10155 HMPREF1078_RS10160: HMPREF1078_RS10160 - OmpA family protein, at 657,284 to 659,272 _RS10160
Locus Name Description Strand Phenotype
HMPREF1078_RS10110 HMPREF1078_RS10110 Crp/Fnr family transcriptional regulator - cofit
HMPREF1078_RS10115 HMPREF1078_RS10115 hypothetical protein - insig.
HMPREF1078_RS10120 HMPREF1078_RS10120 glutamine-hydrolyzing GMP synthase + cofit
HMPREF1078_RS10125 HMPREF1078_RS10125 glutamine-hydrolyzing GMP synthase + insig.
HMPREF1078_RS10130 HMPREF1078_RS10130 sugar O-acetyltransferase - insig.
HMPREF1078_RS10135 HMPREF1078_RS10135 16S rRNA (uracil(1498)-N(3))-methyltransferase - insig.
HMPREF1078_RS10140 HMPREF1078_RS10140 nucleoside transporter C-terminal domain-containing protein - insig.
HMPREF1078_RS10145 HMPREF1078_RS10145 bifunctional nuclease family protein - strong
HMPREF1078_RS10150 HMPREF1078_RS10150 M48 family metallopeptidase - insig.
HMPREF1078_RS10155 HMPREF1078_RS10155 DUF5106 domain-containing protein - insig.
HMPREF1078_RS10160 HMPREF1078_RS10160 OmpA family protein - strong

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