Gene info for HMPREF1078_RS09905 in Parabacteroides merdae CL09T00C40

Annotation: TonB-dependent receptor
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, + strand, nucleotides 587,955 to 591,038
See nucleotide sequence around HMPREF1078_RS09905 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS09880 and HMPREF1078_RS09885 are separated by 76 nucleotidesHMPREF1078_RS09885 and HMPREF1078_RS09890 are separated by 85 nucleotidesHMPREF1078_RS09890 and HMPREF1078_RS09895 are separated by 182 nucleotidesHMPREF1078_RS09895 and HMPREF1078_RS09900 are separated by 250 nucleotidesHMPREF1078_RS09900 and HMPREF1078_RS09905 are separated by 181 nucleotidesHMPREF1078_RS09905 and HMPREF1078_RS09910 are separated by 25 nucleotidesHMPREF1078_RS09910 and HMPREF1078_RS09915 are separated by 193 nucleotidesHMPREF1078_RS09915 and HMPREF1078_RS09920 are separated by 326 nucleotidesHMPREF1078_RS09920 and HMPREF1078_RS09925 are separated by 52 nucleotidesHMPREF1078_RS09925 and HMPREF1078_RS09930 overlap by 4 nucleotides HMPREF1078_RS09880: HMPREF1078_RS09880 - class I mannose-6-phosphate isomerase, at 575,811 to 576,785 _RS09880 HMPREF1078_RS09885: HMPREF1078_RS09885 - alpha amylase C-terminal domain-containing protein, at 576,862 to 578,880 _RS09885 HMPREF1078_RS09890: HMPREF1078_RS09890 - cation:proton antiporter, at 578,966 to 581,281 _RS09890 HMPREF1078_RS09895: HMPREF1078_RS09895 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 581,464 to 583,527 _RS09895 HMPREF1078_RS09900: HMPREF1078_RS09900 - two-component regulator propeller domain-containing protein, at 583,778 to 587,773 _RS09900 HMPREF1078_RS09905: HMPREF1078_RS09905 - TonB-dependent receptor, at 587,955 to 591,038 _RS09905 HMPREF1078_RS09910: HMPREF1078_RS09910 - RagB/SusD family nutrient uptake outer membrane protein, at 591,064 to 592,662 _RS09910 HMPREF1078_RS09915: HMPREF1078_RS09915 - glycoside hydrolase family 88 protein, at 592,856 to 594,025 _RS09915 HMPREF1078_RS09920: HMPREF1078_RS09920 - SUMF1/EgtB/PvdO family nonheme iron enzyme, at 594,352 to 597,690 _RS09920 HMPREF1078_RS09925: HMPREF1078_RS09925 - AAA family ATPase, at 597,743 to 600,703 _RS09925 HMPREF1078_RS09930: HMPREF1078_RS09930 - exonuclease SbcCD subunit D, at 600,700 to 601,944 _RS09930
Locus Name Description Strand Phenotype
HMPREF1078_RS09880 HMPREF1078_RS09880 class I mannose-6-phosphate isomerase - no data
HMPREF1078_RS09885 HMPREF1078_RS09885 alpha amylase C-terminal domain-containing protein - strong
HMPREF1078_RS09890 HMPREF1078_RS09890 cation:proton antiporter - strong
HMPREF1078_RS09895 HMPREF1078_RS09895 glycoside hydrolase family 2 TIM barrel-domain containing protein - insig.
HMPREF1078_RS09900 HMPREF1078_RS09900 two-component regulator propeller domain-containing protein + insig.
HMPREF1078_RS09905 HMPREF1078_RS09905 TonB-dependent receptor + insig.
HMPREF1078_RS09910 HMPREF1078_RS09910 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1078_RS09915 HMPREF1078_RS09915 glycoside hydrolase family 88 protein + insig.
HMPREF1078_RS09920 HMPREF1078_RS09920 SUMF1/EgtB/PvdO family nonheme iron enzyme + insig.
HMPREF1078_RS09925 HMPREF1078_RS09925 AAA family ATPase - insig.
HMPREF1078_RS09930 HMPREF1078_RS09930 exonuclease SbcCD subunit D - insig.

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