Gene info for HMPREF1078_RS09865 in Parabacteroides merdae CL09T00C40

Annotation: tRNA (guanosine(37)-N1)-methyltransferase TrmD
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, + strand, nucleotides 571,321 to 571,995
See nucleotide sequence around HMPREF1078_RS09865 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS09835 and HMPREF1078_RS09840 are separated by 34 nucleotidesHMPREF1078_RS09840 and HMPREF1078_RS09850 are separated by 543 nucleotidesHMPREF1078_RS09850 and HMPREF1078_RS09855 are separated by 86 nucleotidesHMPREF1078_RS09855 and HMPREF1078_RS09860 overlap by 8 nucleotidesHMPREF1078_RS09860 and HMPREF1078_RS09865 are separated by 263 nucleotidesHMPREF1078_RS09865 and HMPREF1078_RS09870 are separated by 6 nucleotidesHMPREF1078_RS09870 and HMPREF1078_RS09875 are separated by 205 nucleotidesHMPREF1078_RS09875 and HMPREF1078_RS09880 are separated by 118 nucleotidesHMPREF1078_RS09880 and HMPREF1078_RS09885 are separated by 76 nucleotidesHMPREF1078_RS09885 and HMPREF1078_RS09890 are separated by 85 nucleotides HMPREF1078_RS09835: HMPREF1078_RS09835 - YebC/PmpR family DNA-binding transcriptional regulator, at 564,859 to 565,593 _RS09835 HMPREF1078_RS09840: HMPREF1078_RS09840 - phenylalanine--tRNA ligase subunit beta, at 565,628 to 568,093 _RS09840 HMPREF1078_RS09850: HMPREF1078_RS09850 - IS66 family transposase, at 568,637 to 570,208 _RS09850 HMPREF1078_RS09855: HMPREF1078_RS09855 - IS66 family insertion sequence element accessory protein TnpB, at 570,295 to 570,642 _RS09855 HMPREF1078_RS09860: HMPREF1078_RS09860 - hypothetical protein, at 570,635 to 571,057 _RS09860 HMPREF1078_RS09865: HMPREF1078_RS09865 - tRNA (guanosine(37)-N1)-methyltransferase TrmD, at 571,321 to 571,995 _RS09865 HMPREF1078_RS09870: HMPREF1078_RS09870 - DUF5032 domain-containing protein, at 572,002 to 572,880 _RS09870 HMPREF1078_RS09875: HMPREF1078_RS09875 - glycoside hydrolase family 3 C-terminal domain-containing protein, at 573,086 to 575,692 _RS09875 HMPREF1078_RS09880: HMPREF1078_RS09880 - class I mannose-6-phosphate isomerase, at 575,811 to 576,785 _RS09880 HMPREF1078_RS09885: HMPREF1078_RS09885 - alpha amylase C-terminal domain-containing protein, at 576,862 to 578,880 _RS09885 HMPREF1078_RS09890: HMPREF1078_RS09890 - cation:proton antiporter, at 578,966 to 581,281 _RS09890
Locus Name Description Strand Phenotype
HMPREF1078_RS09835 HMPREF1078_RS09835 YebC/PmpR family DNA-binding transcriptional regulator - strong
HMPREF1078_RS09840 HMPREF1078_RS09840 phenylalanine--tRNA ligase subunit beta - no data
HMPREF1078_RS09850 HMPREF1078_RS09850 IS66 family transposase - insig.
HMPREF1078_RS09855 HMPREF1078_RS09855 IS66 family insertion sequence element accessory protein TnpB - insig.
HMPREF1078_RS09860 HMPREF1078_RS09860 hypothetical protein - sig.
HMPREF1078_RS09865 HMPREF1078_RS09865 tRNA (guanosine(37)-N1)-methyltransferase TrmD + no data
HMPREF1078_RS09870 HMPREF1078_RS09870 DUF5032 domain-containing protein - insig.
HMPREF1078_RS09875 HMPREF1078_RS09875 glycoside hydrolase family 3 C-terminal domain-containing protein + cofit
HMPREF1078_RS09880 HMPREF1078_RS09880 class I mannose-6-phosphate isomerase - no data
HMPREF1078_RS09885 HMPREF1078_RS09885 alpha amylase C-terminal domain-containing protein - strong
HMPREF1078_RS09890 HMPREF1078_RS09890 cation:proton antiporter - strong

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