Gene info for HMPREF1078_RS09850 in Parabacteroides merdae CL09T00C40

Annotation: IS66 family transposase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, - strand, nucleotides 568,637 to 570,208
See nucleotide sequence around HMPREF1078_RS09850 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS09820 and HMPREF1078_RS09825 are separated by 66 nucleotidesHMPREF1078_RS09825 and HMPREF1078_RS09830 are separated by 45 nucleotidesHMPREF1078_RS09830 and HMPREF1078_RS09835 are separated by 144 nucleotidesHMPREF1078_RS09835 and HMPREF1078_RS09840 are separated by 34 nucleotidesHMPREF1078_RS09840 and HMPREF1078_RS09850 are separated by 543 nucleotidesHMPREF1078_RS09850 and HMPREF1078_RS09855 are separated by 86 nucleotidesHMPREF1078_RS09855 and HMPREF1078_RS09860 overlap by 8 nucleotidesHMPREF1078_RS09860 and HMPREF1078_RS09865 are separated by 263 nucleotidesHMPREF1078_RS09865 and HMPREF1078_RS09870 are separated by 6 nucleotidesHMPREF1078_RS09870 and HMPREF1078_RS09875 are separated by 205 nucleotides HMPREF1078_RS09820: HMPREF1078_RS09820 - peroxide stress protein YaaA, at 562,027 to 562,791 _RS09820 HMPREF1078_RS09825: HMPREF1078_RS09825 - 6-bladed beta-propeller, at 562,858 to 563,913 _RS09825 HMPREF1078_RS09830: HMPREF1078_RS09830 - hypothetical protein, at 563,959 to 564,714 _RS09830 HMPREF1078_RS09835: HMPREF1078_RS09835 - YebC/PmpR family DNA-binding transcriptional regulator, at 564,859 to 565,593 _RS09835 HMPREF1078_RS09840: HMPREF1078_RS09840 - phenylalanine--tRNA ligase subunit beta, at 565,628 to 568,093 _RS09840 HMPREF1078_RS09850: HMPREF1078_RS09850 - IS66 family transposase, at 568,637 to 570,208 _RS09850 HMPREF1078_RS09855: HMPREF1078_RS09855 - IS66 family insertion sequence element accessory protein TnpB, at 570,295 to 570,642 _RS09855 HMPREF1078_RS09860: HMPREF1078_RS09860 - hypothetical protein, at 570,635 to 571,057 _RS09860 HMPREF1078_RS09865: HMPREF1078_RS09865 - tRNA (guanosine(37)-N1)-methyltransferase TrmD, at 571,321 to 571,995 _RS09865 HMPREF1078_RS09870: HMPREF1078_RS09870 - DUF5032 domain-containing protein, at 572,002 to 572,880 _RS09870 HMPREF1078_RS09875: HMPREF1078_RS09875 - glycoside hydrolase family 3 C-terminal domain-containing protein, at 573,086 to 575,692 _RS09875
Locus Name Description Strand Phenotype
HMPREF1078_RS09820 HMPREF1078_RS09820 peroxide stress protein YaaA + insig.
HMPREF1078_RS09825 HMPREF1078_RS09825 6-bladed beta-propeller + insig.
HMPREF1078_RS09830 HMPREF1078_RS09830 hypothetical protein - insig.
HMPREF1078_RS09835 HMPREF1078_RS09835 YebC/PmpR family DNA-binding transcriptional regulator - strong
HMPREF1078_RS09840 HMPREF1078_RS09840 phenylalanine--tRNA ligase subunit beta - no data
HMPREF1078_RS09850 HMPREF1078_RS09850 IS66 family transposase - insig.
HMPREF1078_RS09855 HMPREF1078_RS09855 IS66 family insertion sequence element accessory protein TnpB - insig.
HMPREF1078_RS09860 HMPREF1078_RS09860 hypothetical protein - sig.
HMPREF1078_RS09865 HMPREF1078_RS09865 tRNA (guanosine(37)-N1)-methyltransferase TrmD + no data
HMPREF1078_RS09870 HMPREF1078_RS09870 DUF5032 domain-containing protein - insig.
HMPREF1078_RS09875 HMPREF1078_RS09875 glycoside hydrolase family 3 C-terminal domain-containing protein + insig.

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