Gene info for HMPREF1078_RS09060 in Parabacteroides merdae CL09T00C40

Annotation: conjugative transposon protein TraM
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, + strand, nucleotides 411,956 to 413,308
See nucleotide sequence around HMPREF1078_RS09060 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS09035 and HMPREF1078_RS09040 are separated by 23 nucleotidesHMPREF1078_RS09040 and HMPREF1078_RS09045 are separated by 3 nucleotidesHMPREF1078_RS09045 and HMPREF1078_RS09050 are separated by 31 nucleotidesHMPREF1078_RS09050 and HMPREF1078_RS09055 are separated by 6 nucleotidesHMPREF1078_RS09055 and HMPREF1078_RS09060 overlap by 20 nucleotidesHMPREF1078_RS09060 and HMPREF1078_RS09065 are separated by 34 nucleotidesHMPREF1078_RS09065 and HMPREF1078_RS09070 are separated by 2 nucleotidesHMPREF1078_RS09070 and HMPREF1078_RS09075 are separated by 7 nucleotidesHMPREF1078_RS09075 and HMPREF1078_RS09080 overlap by 4 nucleotidesHMPREF1078_RS09080 and HMPREF1078_RS09085 overlap by 4 nucleotides HMPREF1078_RS09035: HMPREF1078_RS09035 - DUF3876 domain-containing protein, at 408,964 to 409,344 _RS09035 HMPREF1078_RS09040: HMPREF1078_RS09040 - DUF4141 domain-containing protein, at 409,368 to 409,997 _RS09040 HMPREF1078_RS09045: HMPREF1078_RS09045 - conjugative transposon protein TraJ, at 410,001 to 411,005 _RS09045 HMPREF1078_RS09050: HMPREF1078_RS09050 - conjugative transposon protein TraK, at 411,037 to 411,660 _RS09050 HMPREF1078_RS09055: HMPREF1078_RS09055 - TraL conjugative transposon family protein, at 411,667 to 411,975 _RS09055 HMPREF1078_RS09060: HMPREF1078_RS09060 - conjugative transposon protein TraM, at 411,956 to 413,308 _RS09060 HMPREF1078_RS09065: HMPREF1078_RS09065 - conjugative transposon protein TraN, at 413,343 to 414,329 _RS09065 HMPREF1078_RS09070: HMPREF1078_RS09070 - conjugal transfer protein TraO, at 414,332 to 414,907 _RS09070 HMPREF1078_RS09075: HMPREF1078_RS09075 - toprim domain-containing protein, at 414,915 to 415,817 _RS09075 HMPREF1078_RS09080: HMPREF1078_RS09080 - DUF3872 domain-containing protein, at 415,814 to 416,317 _RS09080 HMPREF1078_RS09085: HMPREF1078_RS09085 - hypothetical protein, at 416,314 to 416,841 _RS09085
Locus Name Description Strand Phenotype
HMPREF1078_RS09035 HMPREF1078_RS09035 DUF3876 domain-containing protein + sig.
HMPREF1078_RS09040 HMPREF1078_RS09040 DUF4141 domain-containing protein + cofit
HMPREF1078_RS09045 HMPREF1078_RS09045 conjugative transposon protein TraJ + cofit
HMPREF1078_RS09050 HMPREF1078_RS09050 conjugative transposon protein TraK + insig.
HMPREF1078_RS09055 HMPREF1078_RS09055 TraL conjugative transposon family protein + cofit
HMPREF1078_RS09060 HMPREF1078_RS09060 conjugative transposon protein TraM + insig.
HMPREF1078_RS09065 HMPREF1078_RS09065 conjugative transposon protein TraN + insig.
HMPREF1078_RS09070 HMPREF1078_RS09070 conjugal transfer protein TraO + insig.
HMPREF1078_RS09075 HMPREF1078_RS09075 toprim domain-containing protein + sig.
HMPREF1078_RS09080 HMPREF1078_RS09080 DUF3872 domain-containing protein + insig.
HMPREF1078_RS09085 HMPREF1078_RS09085 hypothetical protein + insig.

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