Gene info for HMPREF1078_RS08960 in Parabacteroides merdae CL09T00C40

Annotation: sigma-54 dependent transcriptional regulator
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, + strand, nucleotides 391,139 to 392,461
See nucleotide sequence around HMPREF1078_RS08960 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS08935 and HMPREF1078_RS08940 are separated by 162 nucleotidesHMPREF1078_RS08940 and HMPREF1078_RS08945 overlap by 11 nucleotidesHMPREF1078_RS08945 and HMPREF1078_RS08950 are separated by 657 nucleotidesHMPREF1078_RS08950 and HMPREF1078_RS08955 overlap by 1 nucleotidesHMPREF1078_RS08955 and HMPREF1078_RS08960 overlap by 8 nucleotidesHMPREF1078_RS08960 and HMPREF1078_RS08965 are separated by 279 nucleotidesHMPREF1078_RS08965 and HMPREF1078_RS08970 are separated by 238 nucleotidesHMPREF1078_RS08970 and HMPREF1078_RS08975 are separated by 301 nucleotidesHMPREF1078_RS08975 and HMPREF1078_RS08980 are separated by 16 nucleotidesHMPREF1078_RS08980 and HMPREF1078_RS08985 are separated by 131 nucleotides HMPREF1078_RS08935: HMPREF1078_RS08935 - type IA DNA topoisomerase, at 377,737 to 379,824 _RS08935 HMPREF1078_RS08940: HMPREF1078_RS08940 - DUF1896 domain-containing protein, at 379,987 to 380,439 _RS08940 HMPREF1078_RS08945: HMPREF1078_RS08945 - N-6 DNA methylase, at 380,429 to 386,245 _RS08945 HMPREF1078_RS08950: HMPREF1078_RS08950 - tetracycline resistance ribosomal protection protein Tet(Q), at 386,903 to 388,828 _RS08950 HMPREF1078_RS08955: HMPREF1078_RS08955 - ATP-binding protein, at 388,828 to 391,146 _RS08955 HMPREF1078_RS08960: HMPREF1078_RS08960 - sigma-54 dependent transcriptional regulator, at 391,139 to 392,461 _RS08960 HMPREF1078_RS08965: HMPREF1078_RS08965 - dihydrofolate reductase family protein, at 392,741 to 393,163 _RS08965 HMPREF1078_RS08970: HMPREF1078_RS08970 - RteC domain-containing protein, at 393,402 to 394,007 _RS08970 HMPREF1078_RS08975: HMPREF1078_RS08975 - ATP-binding protein, at 394,309 to 395,439 _RS08975 HMPREF1078_RS08980: HMPREF1078_RS08980 - P-loop NTPase fold protein, at 395,456 to 398,710 _RS08980 HMPREF1078_RS08985: HMPREF1078_RS08985 - conjugal transfer protein MobC, at 398,842 to 400,860 _RS08985
Locus Name Description Strand Phenotype
HMPREF1078_RS08935 HMPREF1078_RS08935 type IA DNA topoisomerase + insig.
HMPREF1078_RS08940 HMPREF1078_RS08940 DUF1896 domain-containing protein + insig.
HMPREF1078_RS08945 HMPREF1078_RS08945 N-6 DNA methylase + insig.
HMPREF1078_RS08950 HMPREF1078_RS08950 tetracycline resistance ribosomal protection protein Tet(Q) + insig.
HMPREF1078_RS08955 HMPREF1078_RS08955 ATP-binding protein + insig.
HMPREF1078_RS08960 HMPREF1078_RS08960 sigma-54 dependent transcriptional regulator + insig.
HMPREF1078_RS08965 HMPREF1078_RS08965 dihydrofolate reductase family protein + insig.
HMPREF1078_RS08970 HMPREF1078_RS08970 RteC domain-containing protein + insig.
HMPREF1078_RS08975 HMPREF1078_RS08975 ATP-binding protein + insig.
HMPREF1078_RS08980 HMPREF1078_RS08980 P-loop NTPase fold protein + insig.
HMPREF1078_RS08985 HMPREF1078_RS08985 conjugal transfer protein MobC - insig.

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