Gene info for HMPREF1078_RS08935 in Parabacteroides merdae CL09T00C40

Annotation: type IA DNA topoisomerase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, + strand, nucleotides 377,737 to 379,824
See nucleotide sequence around HMPREF1078_RS08935 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS08910 and HMPREF1078_RS08915 are separated by 31 nucleotidesHMPREF1078_RS08915 and HMPREF1078_RS08920 are separated by 201 nucleotidesHMPREF1078_RS08920 and HMPREF1078_RS08925 are separated by 3 nucleotidesHMPREF1078_RS08925 and HMPREF1078_RS08930 are separated by 20 nucleotidesHMPREF1078_RS08930 and HMPREF1078_RS08935 are separated by 60 nucleotidesHMPREF1078_RS08935 and HMPREF1078_RS08940 are separated by 162 nucleotidesHMPREF1078_RS08940 and HMPREF1078_RS08945 overlap by 11 nucleotidesHMPREF1078_RS08945 and HMPREF1078_RS08950 are separated by 657 nucleotidesHMPREF1078_RS08950 and HMPREF1078_RS08955 overlap by 1 nucleotidesHMPREF1078_RS08955 and HMPREF1078_RS08960 overlap by 8 nucleotides HMPREF1078_RS08910: HMPREF1078_RS08910 - helix-turn-helix domain-containing protein, at 374,530 to 374,835 _RS08910 HMPREF1078_RS08915: HMPREF1078_RS08915 - helix-turn-helix domain-containing protein, at 374,867 to 375,166 _RS08915 HMPREF1078_RS08920: HMPREF1078_RS08920 - helix-turn-helix domain-containing protein, at 375,368 to 375,730 _RS08920 HMPREF1078_RS08925: HMPREF1078_RS08925 - helix-turn-helix domain-containing protein, at 375,734 to 376,084 _RS08925 HMPREF1078_RS08930: HMPREF1078_RS08930 - DUF3945 domain-containing protein, at 376,105 to 377,676 _RS08930 HMPREF1078_RS08935: HMPREF1078_RS08935 - type IA DNA topoisomerase, at 377,737 to 379,824 _RS08935 HMPREF1078_RS08940: HMPREF1078_RS08940 - DUF1896 domain-containing protein, at 379,987 to 380,439 _RS08940 HMPREF1078_RS08945: HMPREF1078_RS08945 - N-6 DNA methylase, at 380,429 to 386,245 _RS08945 HMPREF1078_RS08950: HMPREF1078_RS08950 - tetracycline resistance ribosomal protection protein Tet(Q), at 386,903 to 388,828 _RS08950 HMPREF1078_RS08955: HMPREF1078_RS08955 - ATP-binding protein, at 388,828 to 391,146 _RS08955 HMPREF1078_RS08960: HMPREF1078_RS08960 - sigma-54 dependent transcriptional regulator, at 391,139 to 392,461 _RS08960
Locus Name Description Strand Phenotype
HMPREF1078_RS08910 HMPREF1078_RS08910 helix-turn-helix domain-containing protein - insig.
HMPREF1078_RS08915 HMPREF1078_RS08915 helix-turn-helix domain-containing protein - insig.
HMPREF1078_RS08920 HMPREF1078_RS08920 helix-turn-helix domain-containing protein + insig.
HMPREF1078_RS08925 HMPREF1078_RS08925 helix-turn-helix domain-containing protein + insig.
HMPREF1078_RS08930 HMPREF1078_RS08930 DUF3945 domain-containing protein + insig.
HMPREF1078_RS08935 HMPREF1078_RS08935 type IA DNA topoisomerase + insig.
HMPREF1078_RS08940 HMPREF1078_RS08940 DUF1896 domain-containing protein + insig.
HMPREF1078_RS08945 HMPREF1078_RS08945 N-6 DNA methylase + insig.
HMPREF1078_RS08950 HMPREF1078_RS08950 tetracycline resistance ribosomal protection protein Tet(Q) + insig.
HMPREF1078_RS08955 HMPREF1078_RS08955 ATP-binding protein + insig.
HMPREF1078_RS08960 HMPREF1078_RS08960 sigma-54 dependent transcriptional regulator + insig.

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