Gene info for HMPREF1078_RS08875 in Parabacteroides merdae CL09T00C40

Annotation: DUF1896 family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, + strand, nucleotides 362,627 to 363,076
See nucleotide sequence around HMPREF1078_RS08875 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS08850 and HMPREF1078_RS08855 overlap by 20 nucleotidesHMPREF1078_RS08855 and HMPREF1078_RS08860 are separated by 278 nucleotidesHMPREF1078_RS08860 and HMPREF1078_RS08865 are separated by 146 nucleotidesHMPREF1078_RS08865 and HMPREF1078_RS08870 are separated by 107 nucleotidesHMPREF1078_RS08870 and HMPREF1078_RS08875 are separated by 62 nucleotidesHMPREF1078_RS08875 and HMPREF1078_RS08880 overlap by 11 nucleotidesHMPREF1078_RS08880 and HMPREF1078_RS08885 are separated by 191 nucleotidesHMPREF1078_RS08885 and HMPREF1078_RS08890 are separated by 133 nucleotidesHMPREF1078_RS08890 and HMPREF1078_RS08895 are separated by 610 nucleotidesHMPREF1078_RS08895 and HMPREF1078_RS08900 are separated by 257 nucleotides HMPREF1078_RS08850: HMPREF1078_RS08850 - helix-turn-helix domain-containing protein, at 356,864 to 357,217 _RS08850 HMPREF1078_RS08855: HMPREF1078_RS08855 - helix-turn-helix domain-containing protein, at 357,198 to 357,617 _RS08855 HMPREF1078_RS08860: HMPREF1078_RS08860 - DUF4099 domain-containing protein, at 357,896 to 359,824 _RS08860 HMPREF1078_RS08865: HMPREF1078_RS08865 - type IA DNA topoisomerase, at 359,971 to 362,106 _RS08865 HMPREF1078_RS08870: HMPREF1078_RS08870 - hypothetical protein, at 362,214 to 362,564 _RS08870 HMPREF1078_RS08875: HMPREF1078_RS08875 - DUF1896 family protein, at 362,627 to 363,076 _RS08875 HMPREF1078_RS08880: HMPREF1078_RS08880 - N-6 DNA methylase, at 363,066 to 369,182 _RS08880 HMPREF1078_RS08885: HMPREF1078_RS08885 - TetR/AcrR family transcriptional regulator, at 369,374 to 369,982 _RS08885 HMPREF1078_RS08890: HMPREF1078_RS08890 - site-specific integrase, at 370,116 to 371,222 _RS08890 HMPREF1078_RS08895: HMPREF1078_RS08895 - Imm5 family immunity protein, at 371,833 to 372,585 _RS08895 HMPREF1078_RS08900: HMPREF1078_RS08900 - site-specific integrase, at 372,843 to 374,078 _RS08900
Locus Name Description Strand Phenotype
HMPREF1078_RS08850 HMPREF1078_RS08850 helix-turn-helix domain-containing protein + insig.
HMPREF1078_RS08855 HMPREF1078_RS08855 helix-turn-helix domain-containing protein + insig.
HMPREF1078_RS08860 HMPREF1078_RS08860 DUF4099 domain-containing protein + insig.
HMPREF1078_RS08865 HMPREF1078_RS08865 type IA DNA topoisomerase + insig.
HMPREF1078_RS08870 HMPREF1078_RS08870 hypothetical protein - insig.
HMPREF1078_RS08875 HMPREF1078_RS08875 DUF1896 family protein + insig.
HMPREF1078_RS08880 HMPREF1078_RS08880 N-6 DNA methylase + insig.
HMPREF1078_RS08885 HMPREF1078_RS08885 TetR/AcrR family transcriptional regulator + insig.
HMPREF1078_RS08890 HMPREF1078_RS08890 site-specific integrase + insig.
HMPREF1078_RS08895 HMPREF1078_RS08895 Imm5 family immunity protein + insig.
HMPREF1078_RS08900 HMPREF1078_RS08900 site-specific integrase + insig.

Or browse nearby genes

Or see the comparative fitness browser