Gene info for HMPREF1078_RS08865 in Parabacteroides merdae CL09T00C40

Annotation: type IA DNA topoisomerase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, + strand, nucleotides 359,971 to 362,106
See nucleotide sequence around HMPREF1078_RS08865 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS19880 and HMPREF1078_RS08845 are separated by 97 nucleotidesHMPREF1078_RS08845 and HMPREF1078_RS08850 are separated by 239 nucleotidesHMPREF1078_RS08850 and HMPREF1078_RS08855 overlap by 20 nucleotidesHMPREF1078_RS08855 and HMPREF1078_RS08860 are separated by 278 nucleotidesHMPREF1078_RS08860 and HMPREF1078_RS08865 are separated by 146 nucleotidesHMPREF1078_RS08865 and HMPREF1078_RS08870 are separated by 107 nucleotidesHMPREF1078_RS08870 and HMPREF1078_RS08875 are separated by 62 nucleotidesHMPREF1078_RS08875 and HMPREF1078_RS08880 overlap by 11 nucleotidesHMPREF1078_RS08880 and HMPREF1078_RS08885 are separated by 191 nucleotidesHMPREF1078_RS08885 and HMPREF1078_RS08890 are separated by 133 nucleotides HMPREF1078_RS19880: HMPREF1078_RS19880 - hypothetical protein, at 353,456 to 353,995 _RS19880 HMPREF1078_RS08845: HMPREF1078_RS08845 - DEAD/DEAH box helicase family protein, at 354,093 to 356,624 _RS08845 HMPREF1078_RS08850: HMPREF1078_RS08850 - helix-turn-helix domain-containing protein, at 356,864 to 357,217 _RS08850 HMPREF1078_RS08855: HMPREF1078_RS08855 - helix-turn-helix domain-containing protein, at 357,198 to 357,617 _RS08855 HMPREF1078_RS08860: HMPREF1078_RS08860 - DUF4099 domain-containing protein, at 357,896 to 359,824 _RS08860 HMPREF1078_RS08865: HMPREF1078_RS08865 - type IA DNA topoisomerase, at 359,971 to 362,106 _RS08865 HMPREF1078_RS08870: HMPREF1078_RS08870 - hypothetical protein, at 362,214 to 362,564 _RS08870 HMPREF1078_RS08875: HMPREF1078_RS08875 - DUF1896 family protein, at 362,627 to 363,076 _RS08875 HMPREF1078_RS08880: HMPREF1078_RS08880 - N-6 DNA methylase, at 363,066 to 369,182 _RS08880 HMPREF1078_RS08885: HMPREF1078_RS08885 - TetR/AcrR family transcriptional regulator, at 369,374 to 369,982 _RS08885 HMPREF1078_RS08890: HMPREF1078_RS08890 - site-specific integrase, at 370,116 to 371,222 _RS08890
Locus Name Description Strand Phenotype
HMPREF1078_RS19880 HMPREF1078_RS19880 hypothetical protein + insig.
HMPREF1078_RS08845 HMPREF1078_RS08845 DEAD/DEAH box helicase family protein + insig.
HMPREF1078_RS08850 HMPREF1078_RS08850 helix-turn-helix domain-containing protein + insig.
HMPREF1078_RS08855 HMPREF1078_RS08855 helix-turn-helix domain-containing protein + insig.
HMPREF1078_RS08860 HMPREF1078_RS08860 DUF4099 domain-containing protein + insig.
HMPREF1078_RS08865 HMPREF1078_RS08865 type IA DNA topoisomerase + insig.
HMPREF1078_RS08870 HMPREF1078_RS08870 hypothetical protein - insig.
HMPREF1078_RS08875 HMPREF1078_RS08875 DUF1896 family protein + insig.
HMPREF1078_RS08880 HMPREF1078_RS08880 N-6 DNA methylase + insig.
HMPREF1078_RS08885 HMPREF1078_RS08885 TetR/AcrR family transcriptional regulator + insig.
HMPREF1078_RS08890 HMPREF1078_RS08890 site-specific integrase + insig.

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