Gene info for HMPREF1078_RS08685 in Parabacteroides merdae CL09T00C40

Annotation: ribokinase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, - strand, nucleotides 320,077 to 321,006
See nucleotide sequence around HMPREF1078_RS08685 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS08660 and HMPREF1078_RS08665 are separated by 6 nucleotidesHMPREF1078_RS08665 and HMPREF1078_RS08670 overlap by 29 nucleotidesHMPREF1078_RS08670 and HMPREF1078_RS08675 are separated by 149 nucleotidesHMPREF1078_RS08675 and HMPREF1078_RS08680 are separated by 7 nucleotidesHMPREF1078_RS08680 and HMPREF1078_RS08685 are separated by 25 nucleotidesHMPREF1078_RS08685 and HMPREF1078_RS08690 are separated by 164 nucleotidesHMPREF1078_RS08690 and HMPREF1078_RS08695 are separated by 254 nucleotidesHMPREF1078_RS08695 and HMPREF1078_RS08700 are separated by 243 nucleotidesHMPREF1078_RS08700 and HMPREF1078_RS08705 are separated by 189 nucleotidesHMPREF1078_RS08705 and HMPREF1078_RS08710 are separated by 39 nucleotides HMPREF1078_RS08660: HMPREF1078_RS08660 - glycosyltransferase family 2 protein, at 315,824 to 316,756 _RS08660 HMPREF1078_RS08665: HMPREF1078_RS08665 - GtrA family protein, at 316,763 to 317,146 _RS08665 HMPREF1078_RS08670: HMPREF1078_RS08670 - hypothetical protein, at 317,118 to 317,876 _RS08670 HMPREF1078_RS08675: HMPREF1078_RS08675 - GRP family sugar transporter, at 318,026 to 319,027 _RS08675 HMPREF1078_RS08680: HMPREF1078_RS08680 - nucleoside hydrolase, at 319,035 to 320,051 _RS08680 HMPREF1078_RS08685: HMPREF1078_RS08685 - ribokinase, at 320,077 to 321,006 _RS08685 HMPREF1078_RS08690: HMPREF1078_RS08690 - hypothetical protein, at 321,171 to 322,718 _RS08690 HMPREF1078_RS08695: HMPREF1078_RS08695 - alpha/beta hydrolase, at 322,973 to 323,941 _RS08695 HMPREF1078_RS08700: HMPREF1078_RS08700 - alpha-L-arabinofuranosidase C-terminal domain-containing protein, at 324,185 to 326,140 _RS08700 HMPREF1078_RS08705: HMPREF1078_RS08705 - aldose epimerase family protein, at 326,330 to 327,409 _RS08705 HMPREF1078_RS08710: HMPREF1078_RS08710 - MFS transporter, at 327,449 to 328,705 _RS08710
Locus Name Description Strand Phenotype
HMPREF1078_RS08660 HMPREF1078_RS08660 glycosyltransferase family 2 protein - strong
HMPREF1078_RS08665 HMPREF1078_RS08665 GtrA family protein - strong
HMPREF1078_RS08670 HMPREF1078_RS08670 hypothetical protein - strong
HMPREF1078_RS08675 HMPREF1078_RS08675 GRP family sugar transporter - insig.
HMPREF1078_RS08680 HMPREF1078_RS08680 nucleoside hydrolase - insig.
HMPREF1078_RS08685 HMPREF1078_RS08685 ribokinase - insig.
HMPREF1078_RS08690 HMPREF1078_RS08690 hypothetical protein + insig.
HMPREF1078_RS08695 HMPREF1078_RS08695 alpha/beta hydrolase + insig.
HMPREF1078_RS08700 HMPREF1078_RS08700 alpha-L-arabinofuranosidase C-terminal domain-containing protein - insig.
HMPREF1078_RS08705 HMPREF1078_RS08705 aldose epimerase family protein + strong
HMPREF1078_RS08710 HMPREF1078_RS08710 MFS transporter + no data

Or browse nearby genes

Or see the comparative fitness browser