Gene info for HMPREF1078_RS08540 in Parabacteroides merdae CL09T00C40

Annotation: deoxyribonuclease IV
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, - strand, nucleotides 287,520 to 288,356
See nucleotide sequence around HMPREF1078_RS08540 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS08515 and HMPREF1078_RS08520 are separated by 382 nucleotidesHMPREF1078_RS08520 and HMPREF1078_RS08525 are separated by 67 nucleotidesHMPREF1078_RS08525 and HMPREF1078_RS08530 are separated by 65 nucleotidesHMPREF1078_RS08530 and HMPREF1078_RS08535 are separated by 11 nucleotidesHMPREF1078_RS08535 and HMPREF1078_RS08540 are separated by 135 nucleotidesHMPREF1078_RS08540 and HMPREF1078_RS08545 are separated by 22 nucleotidesHMPREF1078_RS08545 and HMPREF1078_RS08550 are separated by 67 nucleotidesHMPREF1078_RS08550 and HMPREF1078_RS08555 are separated by 170 nucleotidesHMPREF1078_RS08555 and HMPREF1078_RS08560 are separated by 101 nucleotidesHMPREF1078_RS08560 and HMPREF1078_RS08565 are separated by 173 nucleotides HMPREF1078_RS08515: HMPREF1078_RS08515 - DUF1080 domain-containing protein, at 281,313 to 282,692 _RS08515 HMPREF1078_RS08520: HMPREF1078_RS08520 - HAD family phosphatase, at 283,075 to 283,719 _RS08520 HMPREF1078_RS08525: HMPREF1078_RS08525 - outer membrane beta-barrel protein, at 283,787 to 284,257 _RS08525 HMPREF1078_RS08530: HMPREF1078_RS08530 - C69 family dipeptidase, at 284,323 to 285,963 _RS08530 HMPREF1078_RS08535: HMPREF1078_RS08535 - sodium:proton antiporter NhaD, at 285,975 to 287,384 _RS08535 HMPREF1078_RS08540: HMPREF1078_RS08540 - deoxyribonuclease IV, at 287,520 to 288,356 _RS08540 HMPREF1078_RS08545: HMPREF1078_RS08545 - PaaI family thioesterase, at 288,379 to 288,852 _RS08545 HMPREF1078_RS08550: HMPREF1078_RS08550 - DUF456 domain-containing protein, at 288,920 to 289,396 _RS08550 HMPREF1078_RS08555: HMPREF1078_RS08555 - DUF3795 domain-containing protein, at 289,567 to 289,905 _RS08555 HMPREF1078_RS08560: HMPREF1078_RS08560 - PhoH family protein, at 290,007 to 291,338 _RS08560 HMPREF1078_RS08565: HMPREF1078_RS08565 - glycoside hydrolase family 20 zincin-like fold domain-containing protein, at 291,512 to 292,126 _RS08565
Locus Name Description Strand Phenotype
HMPREF1078_RS08515 HMPREF1078_RS08515 DUF1080 domain-containing protein - insig.
HMPREF1078_RS08520 HMPREF1078_RS08520 HAD family phosphatase + insig.
HMPREF1078_RS08525 HMPREF1078_RS08525 outer membrane beta-barrel protein - insig.
HMPREF1078_RS08530 HMPREF1078_RS08530 C69 family dipeptidase - insig.
HMPREF1078_RS08535 HMPREF1078_RS08535 sodium:proton antiporter NhaD - insig.
HMPREF1078_RS08540 HMPREF1078_RS08540 deoxyribonuclease IV - insig.
HMPREF1078_RS08545 HMPREF1078_RS08545 PaaI family thioesterase - insig.
HMPREF1078_RS08550 HMPREF1078_RS08550 DUF456 domain-containing protein - insig.
HMPREF1078_RS08555 HMPREF1078_RS08555 DUF3795 domain-containing protein - insig.
HMPREF1078_RS08560 HMPREF1078_RS08560 PhoH family protein - insig.
HMPREF1078_RS08565 HMPREF1078_RS08565 glycoside hydrolase family 20 zincin-like fold domain-containing protein + insig.

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