Gene info for HMPREF1078_RS08405 in Parabacteroides merdae CL09T00C40

Annotation: DUF2148 domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, - strand, nucleotides 253,012 to 253,545
See nucleotide sequence around HMPREF1078_RS08405 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS08380 and HMPREF1078_RS08385 are separated by 2 nucleotidesHMPREF1078_RS08385 and HMPREF1078_RS08390 overlap by 4 nucleotidesHMPREF1078_RS08390 and HMPREF1078_RS08395 are separated by 12 nucleotidesHMPREF1078_RS08395 and HMPREF1078_RS08400 are separated by 99 nucleotidesHMPREF1078_RS08400 and HMPREF1078_RS08405 are separated by 3 nucleotidesHMPREF1078_RS08405 and HMPREF1078_RS08410 are separated by 42 nucleotidesHMPREF1078_RS08410 and HMPREF1078_RS08415 are separated by 168 nucleotidesHMPREF1078_RS08415 and HMPREF1078_RS08420 are separated by 125 nucleotidesHMPREF1078_RS08420 and HMPREF1078_RS08425 overlap by 23 nucleotidesHMPREF1078_RS08425 and HMPREF1078_RS08430 are separated by 5 nucleotides HMPREF1078_RS08380: HMPREF1078_RS08380 - FAD-binding protein, at 247,290 to 248,876 _RS08380 HMPREF1078_RS08385: HMPREF1078_RS08385 - hypothetical protein, at 248,879 to 249,589 _RS08385 HMPREF1078_RS08390: HMPREF1078_RS08390 - hypothetical protein, at 249,586 to 250,569 _RS08390 HMPREF1078_RS08395: HMPREF1078_RS08395 - DNA repair protein RadA, at 250,582 to 251,952 _RS08395 HMPREF1078_RS08400: HMPREF1078_RS08400 - hypothetical protein, at 252,052 to 253,008 _RS08400 HMPREF1078_RS08405: HMPREF1078_RS08405 - DUF2148 domain-containing protein, at 253,012 to 253,545 _RS08405 HMPREF1078_RS08410: HMPREF1078_RS08410 - KamA family protein, at 253,588 to 255,699 _RS08410 HMPREF1078_RS08415: HMPREF1078_RS08415 - carbon-nitrogen hydrolase family protein, at 255,868 to 257,400 _RS08415 HMPREF1078_RS08420: HMPREF1078_RS08420 - efflux transporter outer membrane subunit, at 257,526 to 258,971 _RS08420 HMPREF1078_RS08425: HMPREF1078_RS08425 - efflux RND transporter permease subunit, at 258,949 to 262,101 _RS08425 HMPREF1078_RS08430: HMPREF1078_RS08430 - efflux RND transporter periplasmic adaptor subunit, at 262,107 to 263,270 _RS08430
Locus Name Description Strand Phenotype
HMPREF1078_RS08380 HMPREF1078_RS08380 FAD-binding protein - insig.
HMPREF1078_RS08385 HMPREF1078_RS08385 hypothetical protein - insig.
HMPREF1078_RS08390 HMPREF1078_RS08390 hypothetical protein - cofit
HMPREF1078_RS08395 HMPREF1078_RS08395 DNA repair protein RadA - cofit
HMPREF1078_RS08400 HMPREF1078_RS08400 hypothetical protein - insig.
HMPREF1078_RS08405 HMPREF1078_RS08405 DUF2148 domain-containing protein - insig.
HMPREF1078_RS08410 HMPREF1078_RS08410 KamA family protein - insig.
HMPREF1078_RS08415 HMPREF1078_RS08415 carbon-nitrogen hydrolase family protein - insig.
HMPREF1078_RS08420 HMPREF1078_RS08420 efflux transporter outer membrane subunit - insig.
HMPREF1078_RS08425 HMPREF1078_RS08425 efflux RND transporter permease subunit - insig.
HMPREF1078_RS08430 HMPREF1078_RS08430 efflux RND transporter periplasmic adaptor subunit - insig.

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