Gene info for HMPREF1078_RS08365 in Parabacteroides merdae CL09T00C40

Annotation: site-specific integrase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, - strand, nucleotides 240,217 to 241,464
See nucleotide sequence around HMPREF1078_RS08365 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS08340 and HMPREF1078_RS19580 are separated by 323 nucleotidesHMPREF1078_RS19580 and HMPREF1078_RS08355 are separated by 370 nucleotidesHMPREF1078_RS08355 and HMPREF1078_RS19585 are separated by 5 nucleotidesHMPREF1078_RS19585 and HMPREF1078_RS19355 are separated by 33 nucleotidesHMPREF1078_RS19355 and HMPREF1078_RS08365 are separated by 4 nucleotidesHMPREF1078_RS08365 and HMPREF1078_RS08370 are separated by 364 nucleotidesHMPREF1078_RS08370 and HMPREF1078_RS08375 overlap by 8 nucleotidesHMPREF1078_RS08375 and HMPREF1078_RS08380 are separated by 177 nucleotidesHMPREF1078_RS08380 and HMPREF1078_RS08385 are separated by 2 nucleotidesHMPREF1078_RS08385 and HMPREF1078_RS08390 overlap by 4 nucleotides HMPREF1078_RS08340: HMPREF1078_RS08340 - sigma-70 family RNA polymerase sigma factor, at 237,433 to 237,993 _RS08340 HMPREF1078_RS19580: HMPREF1078_RS19580 - hypothetical protein, at 238,317 to 238,568 _RS19580 HMPREF1078_RS08355: HMPREF1078_RS08355 - GNAT family N-acetyltransferase, at 238,939 to 239,538 _RS08355 HMPREF1078_RS19585: HMPREF1078_RS19585 - hypothetical protein, at 239,544 to 239,711 _RS19585 HMPREF1078_RS19355: HMPREF1078_RS19355 - hypothetical protein, at 239,745 to 240,212 _RS19355 HMPREF1078_RS08365: HMPREF1078_RS08365 - site-specific integrase, at 240,217 to 241,464 _RS08365 HMPREF1078_RS08370: HMPREF1078_RS08370 - alginate lyase family protein, at 241,829 to 242,986 _RS08370 HMPREF1078_RS08375: HMPREF1078_RS08375 - two-component regulator propeller domain-containing protein, at 242,979 to 247,112 _RS08375 HMPREF1078_RS08380: HMPREF1078_RS08380 - FAD-binding protein, at 247,290 to 248,876 _RS08380 HMPREF1078_RS08385: HMPREF1078_RS08385 - hypothetical protein, at 248,879 to 249,589 _RS08385 HMPREF1078_RS08390: HMPREF1078_RS08390 - hypothetical protein, at 249,586 to 250,569 _RS08390
Locus Name Description Strand Phenotype
HMPREF1078_RS08340 HMPREF1078_RS08340 sigma-70 family RNA polymerase sigma factor - insig.
HMPREF1078_RS19580 HMPREF1078_RS19580 hypothetical protein + insig.
HMPREF1078_RS08355 HMPREF1078_RS08355 GNAT family N-acetyltransferase - insig.
HMPREF1078_RS19585 HMPREF1078_RS19585 hypothetical protein - no data
HMPREF1078_RS19355 HMPREF1078_RS19355 hypothetical protein - insig.
HMPREF1078_RS08365 HMPREF1078_RS08365 site-specific integrase - insig.
HMPREF1078_RS08370 HMPREF1078_RS08370 alginate lyase family protein - insig.
HMPREF1078_RS08375 HMPREF1078_RS08375 two-component regulator propeller domain-containing protein - insig.
HMPREF1078_RS08380 HMPREF1078_RS08380 FAD-binding protein - insig.
HMPREF1078_RS08385 HMPREF1078_RS08385 hypothetical protein - insig.
HMPREF1078_RS08390 HMPREF1078_RS08390 hypothetical protein - insig.

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