Gene info for HMPREF1078_RS08340 in Parabacteroides merdae CL09T00C40

Annotation: sigma-70 family RNA polymerase sigma factor
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, - strand, nucleotides 237,433 to 237,993
See nucleotide sequence around HMPREF1078_RS08340 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS08315 and HMPREF1078_RS08320 are separated by 477 nucleotidesHMPREF1078_RS08320 and HMPREF1078_RS08325 are separated by 43 nucleotidesHMPREF1078_RS08325 and HMPREF1078_RS19570 are separated by 340 nucleotidesHMPREF1078_RS19570 and HMPREF1078_RS19575 are separated by 4 nucleotidesHMPREF1078_RS19575 and HMPREF1078_RS08340 are separated by 31 nucleotidesHMPREF1078_RS08340 and HMPREF1078_RS19580 are separated by 323 nucleotidesHMPREF1078_RS19580 and HMPREF1078_RS08355 are separated by 370 nucleotidesHMPREF1078_RS08355 and HMPREF1078_RS19585 are separated by 5 nucleotidesHMPREF1078_RS19585 and HMPREF1078_RS19355 are separated by 33 nucleotidesHMPREF1078_RS19355 and HMPREF1078_RS08365 are separated by 4 nucleotides HMPREF1078_RS08315: HMPREF1078_RS08315 - DUF3408 domain-containing protein, at 234,834 to 235,328 _RS08315 HMPREF1078_RS08320: HMPREF1078_RS08320 - helix-turn-helix domain-containing protein, at 235,806 to 236,117 _RS08320 HMPREF1078_RS08325: HMPREF1078_RS08325 - helix-turn-helix domain-containing protein, at 236,161 to 236,484 _RS08325 HMPREF1078_RS19570: HMPREF1078_RS19570 - hypothetical protein, at 236,825 to 237,004 _RS19570 HMPREF1078_RS19575: HMPREF1078_RS19575 - hypothetical protein, at 237,009 to 237,401 _RS19575 HMPREF1078_RS08340: HMPREF1078_RS08340 - sigma-70 family RNA polymerase sigma factor, at 237,433 to 237,993 _RS08340 HMPREF1078_RS19580: HMPREF1078_RS19580 - hypothetical protein, at 238,317 to 238,568 _RS19580 HMPREF1078_RS08355: HMPREF1078_RS08355 - GNAT family N-acetyltransferase, at 238,939 to 239,538 _RS08355 HMPREF1078_RS19585: HMPREF1078_RS19585 - hypothetical protein, at 239,544 to 239,711 _RS19585 HMPREF1078_RS19355: HMPREF1078_RS19355 - hypothetical protein, at 239,745 to 240,212 _RS19355 HMPREF1078_RS08365: HMPREF1078_RS08365 - site-specific integrase, at 240,217 to 241,464 _RS08365
Locus Name Description Strand Phenotype
HMPREF1078_RS08315 HMPREF1078_RS08315 DUF3408 domain-containing protein - insig.
HMPREF1078_RS08320 HMPREF1078_RS08320 helix-turn-helix domain-containing protein + no data
HMPREF1078_RS08325 HMPREF1078_RS08325 helix-turn-helix domain-containing protein + no data
HMPREF1078_RS19570 HMPREF1078_RS19570 hypothetical protein - insig.
HMPREF1078_RS19575 HMPREF1078_RS19575 hypothetical protein - insig.
HMPREF1078_RS08340 HMPREF1078_RS08340 sigma-70 family RNA polymerase sigma factor - insig.
HMPREF1078_RS19580 HMPREF1078_RS19580 hypothetical protein + insig.
HMPREF1078_RS08355 HMPREF1078_RS08355 GNAT family N-acetyltransferase - insig.
HMPREF1078_RS19585 HMPREF1078_RS19585 hypothetical protein - no data
HMPREF1078_RS19355 HMPREF1078_RS19355 hypothetical protein - insig.
HMPREF1078_RS08365 HMPREF1078_RS08365 site-specific integrase - insig.

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