Gene info for HMPREF1078_RS08320 in Parabacteroides merdae CL09T00C40

Annotation: helix-turn-helix domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, + strand, nucleotides 235,806 to 236,117
See nucleotide sequence around HMPREF1078_RS08320 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS08295 and HMPREF1078_RS08300 are separated by 7 nucleotidesHMPREF1078_RS08300 and HMPREF1078_RS08305 are separated by 29 nucleotidesHMPREF1078_RS08305 and HMPREF1078_RS08310 are separated by 4 nucleotidesHMPREF1078_RS08310 and HMPREF1078_RS08315 are separated by 227 nucleotidesHMPREF1078_RS08315 and HMPREF1078_RS08320 are separated by 477 nucleotidesHMPREF1078_RS08320 and HMPREF1078_RS08325 are separated by 43 nucleotidesHMPREF1078_RS08325 and HMPREF1078_RS19570 are separated by 340 nucleotidesHMPREF1078_RS19570 and HMPREF1078_RS19575 are separated by 4 nucleotidesHMPREF1078_RS19575 and HMPREF1078_RS08340 are separated by 31 nucleotidesHMPREF1078_RS08340 and HMPREF1078_RS19580 are separated by 323 nucleotides HMPREF1078_RS08295: HMPREF1078_RS08295 - site-specific integrase, at 231,585 to 232,511 _RS08295 HMPREF1078_RS08300: HMPREF1078_RS08300 - hypothetical protein, at 232,519 to 233,280 _RS08300 HMPREF1078_RS08305: HMPREF1078_RS08305 - relaxase/mobilization nuclease domain-containing protein, at 233,310 to 234,230 _RS08305 HMPREF1078_RS08310: HMPREF1078_RS08310 - plasmid mobilization relaxosome protein MobC, at 234,235 to 234,606 _RS08310 HMPREF1078_RS08315: HMPREF1078_RS08315 - DUF3408 domain-containing protein, at 234,834 to 235,328 _RS08315 HMPREF1078_RS08320: HMPREF1078_RS08320 - helix-turn-helix domain-containing protein, at 235,806 to 236,117 _RS08320 HMPREF1078_RS08325: HMPREF1078_RS08325 - helix-turn-helix domain-containing protein, at 236,161 to 236,484 _RS08325 HMPREF1078_RS19570: HMPREF1078_RS19570 - hypothetical protein, at 236,825 to 237,004 _RS19570 HMPREF1078_RS19575: HMPREF1078_RS19575 - hypothetical protein, at 237,009 to 237,401 _RS19575 HMPREF1078_RS08340: HMPREF1078_RS08340 - sigma-70 family RNA polymerase sigma factor, at 237,433 to 237,993 _RS08340 HMPREF1078_RS19580: HMPREF1078_RS19580 - hypothetical protein, at 238,317 to 238,568 _RS19580
Locus Name Description Strand Phenotype
HMPREF1078_RS08295 HMPREF1078_RS08295 site-specific integrase - insig.
HMPREF1078_RS08300 HMPREF1078_RS08300 hypothetical protein - insig.
HMPREF1078_RS08305 HMPREF1078_RS08305 relaxase/mobilization nuclease domain-containing protein - insig.
HMPREF1078_RS08310 HMPREF1078_RS08310 plasmid mobilization relaxosome protein MobC - no data
HMPREF1078_RS08315 HMPREF1078_RS08315 DUF3408 domain-containing protein - insig.
HMPREF1078_RS08320 HMPREF1078_RS08320 helix-turn-helix domain-containing protein + no data
HMPREF1078_RS08325 HMPREF1078_RS08325 helix-turn-helix domain-containing protein + no data
HMPREF1078_RS19570 HMPREF1078_RS19570 hypothetical protein - insig.
HMPREF1078_RS19575 HMPREF1078_RS19575 hypothetical protein - insig.
HMPREF1078_RS08340 HMPREF1078_RS08340 sigma-70 family RNA polymerase sigma factor - insig.
HMPREF1078_RS19580 HMPREF1078_RS19580 hypothetical protein + insig.

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