Gene info for HMPREF1078_RS08145 in Parabacteroides merdae CL09T00C40

Annotation: TonB-dependent receptor
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, - strand, nucleotides 196,481 to 199,561
See nucleotide sequence around HMPREF1078_RS08145 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS08120 and HMPREF1078_RS08125 are separated by 108 nucleotidesHMPREF1078_RS08125 and HMPREF1078_RS08130 are separated by 210 nucleotidesHMPREF1078_RS08130 and HMPREF1078_RS08135 are separated by 32 nucleotidesHMPREF1078_RS08135 and HMPREF1078_RS08140 are separated by 86 nucleotidesHMPREF1078_RS08140 and HMPREF1078_RS08145 are separated by 25 nucleotidesHMPREF1078_RS08145 and HMPREF1078_RS08150 are separated by 919 nucleotidesHMPREF1078_RS08150 and HMPREF1078_RS08155 are separated by 8 nucleotidesHMPREF1078_RS08155 and HMPREF1078_RS08160 overlap by 47 nucleotidesHMPREF1078_RS08160 and HMPREF1078_RS19865 overlap by 65 nucleotidesHMPREF1078_RS19865 and HMPREF1078_RS08165 are separated by 118 nucleotides HMPREF1078_RS08120: HMPREF1078_RS08120 - polyamine ABC transporter ATP-binding protein, at 188,244 to 189,650 _RS08120 HMPREF1078_RS08125: HMPREF1078_RS08125 - uracil-xanthine permease family protein, at 189,759 to 190,955 _RS08125 HMPREF1078_RS08130: HMPREF1078_RS08130 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 191,166 to 193,646 _RS08130 HMPREF1078_RS08135: HMPREF1078_RS08135 - glycoside hydrolase family 88 protein, at 193,679 to 194,887 _RS08135 HMPREF1078_RS08140: HMPREF1078_RS08140 - RagB/SusD family nutrient uptake outer membrane protein, at 194,974 to 196,455 _RS08140 HMPREF1078_RS08145: HMPREF1078_RS08145 - TonB-dependent receptor, at 196,481 to 199,561 _RS08145 HMPREF1078_RS08150: HMPREF1078_RS08150 - helix-turn-helix domain-containing protein, at 200,481 to 200,792 _RS08150 HMPREF1078_RS08155: HMPREF1078_RS08155 - IS5 family transposase, at 200,801 to 201,265 _RS08155 HMPREF1078_RS08160: HMPREF1078_RS08160 - transposase, at 201,219 to 201,506 _RS08160 HMPREF1078_RS19865: HMPREF1078_RS19865 - hypothetical protein, at 201,442 to 201,696 _RS19865 HMPREF1078_RS08165: HMPREF1078_RS08165 - helix-turn-helix domain-containing protein, at 201,815 to 202,027 _RS08165
Locus Name Description Strand Phenotype
HMPREF1078_RS08120 HMPREF1078_RS08120 polyamine ABC transporter ATP-binding protein - insig.
HMPREF1078_RS08125 HMPREF1078_RS08125 uracil-xanthine permease family protein - insig.
HMPREF1078_RS08130 HMPREF1078_RS08130 glycoside hydrolase family 2 TIM barrel-domain containing protein - insig.
HMPREF1078_RS08135 HMPREF1078_RS08135 glycoside hydrolase family 88 protein - insig.
HMPREF1078_RS08140 HMPREF1078_RS08140 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1078_RS08145 HMPREF1078_RS08145 TonB-dependent receptor - insig.
HMPREF1078_RS08150 HMPREF1078_RS08150 helix-turn-helix domain-containing protein - insig.
HMPREF1078_RS08155 HMPREF1078_RS08155 IS5 family transposase - insig.
HMPREF1078_RS08160 HMPREF1078_RS08160 transposase - insig.
HMPREF1078_RS19865 HMPREF1078_RS19865 hypothetical protein - insig.
HMPREF1078_RS08165 HMPREF1078_RS08165 helix-turn-helix domain-containing protein - insig.

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