Gene info for HMPREF1078_RS08065 in Parabacteroides merdae CL09T00C40

Annotation: Cof-type HAD-IIB family hydrolase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, + strand, nucleotides 176,322 to 177,554
See nucleotide sequence around HMPREF1078_RS08065 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS08040 and HMPREF1078_RS08045 are separated by 10 nucleotidesHMPREF1078_RS08045 and HMPREF1078_RS08050 are separated by 167 nucleotidesHMPREF1078_RS08050 and HMPREF1078_RS08055 are separated by 4 nucleotidesHMPREF1078_RS08055 and HMPREF1078_RS08060 are separated by 134 nucleotidesHMPREF1078_RS08060 and HMPREF1078_RS08065 are separated by 132 nucleotidesHMPREF1078_RS08065 and HMPREF1078_RS08070 overlap by 4 nucleotidesHMPREF1078_RS08070 and HMPREF1078_RS08075 are separated by 12 nucleotidesHMPREF1078_RS08075 and HMPREF1078_RS08080 are separated by 20 nucleotidesHMPREF1078_RS08080 and HMPREF1078_RS08085 are separated by 90 nucleotidesHMPREF1078_RS08085 and HMPREF1078_RS08090 are separated by 46 nucleotides HMPREF1078_RS08040: HMPREF1078_RS08040 - winged helix DNA-binding domain-containing protein, at 170,637 to 171,707 _RS08040 HMPREF1078_RS08045: HMPREF1078_RS08045 - L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha, at 171,718 to 173,010 _RS08045 HMPREF1078_RS08050: HMPREF1078_RS08050 - membrane protein, at 173,178 to 173,468 _RS08050 HMPREF1078_RS08055: HMPREF1078_RS08055 - glycine zipper family protein, at 173,473 to 174,135 _RS08055 HMPREF1078_RS08060: HMPREF1078_RS08060 - AAA domain-containing protein, at 174,270 to 176,189 _RS08060 HMPREF1078_RS08065: HMPREF1078_RS08065 - Cof-type HAD-IIB family hydrolase, at 176,322 to 177,554 _RS08065 HMPREF1078_RS08070: HMPREF1078_RS08070 - isochorismate synthase, at 177,551 to 178,672 _RS08070 HMPREF1078_RS08075: HMPREF1078_RS08075 - cysteine synthase A, at 178,685 to 179,626 _RS08075 HMPREF1078_RS08080: HMPREF1078_RS08080 - ThuA domain-containing protein, at 179,647 to 180,561 _RS08080 HMPREF1078_RS08085: HMPREF1078_RS08085 - hypothetical protein, at 180,652 to 181,515 _RS08085 HMPREF1078_RS08090: HMPREF1078_RS08090 - ClC family H(+)/Cl(-) exchange transporter, at 181,562 to 183,103 _RS08090
Locus Name Description Strand Phenotype
HMPREF1078_RS08040 HMPREF1078_RS08040 winged helix DNA-binding domain-containing protein - insig.
HMPREF1078_RS08045 HMPREF1078_RS08045 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha - strong
HMPREF1078_RS08050 HMPREF1078_RS08050 membrane protein + insig.
HMPREF1078_RS08055 HMPREF1078_RS08055 glycine zipper family protein - insig.
HMPREF1078_RS08060 HMPREF1078_RS08060 AAA domain-containing protein + insig.
HMPREF1078_RS08065 HMPREF1078_RS08065 Cof-type HAD-IIB family hydrolase + cofit
HMPREF1078_RS08070 HMPREF1078_RS08070 isochorismate synthase + insig.
HMPREF1078_RS08075 HMPREF1078_RS08075 cysteine synthase A + no data
HMPREF1078_RS08080 HMPREF1078_RS08080 ThuA domain-containing protein - insig.
HMPREF1078_RS08085 HMPREF1078_RS08085 hypothetical protein + insig.
HMPREF1078_RS08090 HMPREF1078_RS08090 ClC family H(+)/Cl(-) exchange transporter + insig.

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