Gene info for HMPREF1078_RS08045 in Parabacteroides merdae CL09T00C40

Annotation: L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, - strand, nucleotides 171,718 to 173,010
See nucleotide sequence around HMPREF1078_RS08045 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS08020 and HMPREF1078_RS08025 are separated by 9 nucleotidesHMPREF1078_RS08025 and HMPREF1078_RS08030 are separated by 130 nucleotidesHMPREF1078_RS08030 and HMPREF1078_RS08035 are separated by 179 nucleotidesHMPREF1078_RS08035 and HMPREF1078_RS08040 are separated by 268 nucleotidesHMPREF1078_RS08040 and HMPREF1078_RS08045 are separated by 10 nucleotidesHMPREF1078_RS08045 and HMPREF1078_RS08050 are separated by 167 nucleotidesHMPREF1078_RS08050 and HMPREF1078_RS08055 are separated by 4 nucleotidesHMPREF1078_RS08055 and HMPREF1078_RS08060 are separated by 134 nucleotidesHMPREF1078_RS08060 and HMPREF1078_RS08065 are separated by 132 nucleotidesHMPREF1078_RS08065 and HMPREF1078_RS08070 overlap by 4 nucleotides HMPREF1078_RS08020: HMPREF1078_RS08020 - phosphatidylglycerol lysyltransferase domain-containing protein, at 165,926 to 166,834 _RS08020 HMPREF1078_RS08025: HMPREF1078_RS08025 - GNAT family N-acetyltransferase, at 166,844 to 167,788 _RS08025 HMPREF1078_RS08030: HMPREF1078_RS08030 - MATE family efflux transporter, at 167,919 to 169,262 _RS08030 HMPREF1078_RS08035: HMPREF1078_RS08035 - magnesium transporter CorA family protein, at 169,442 to 170,368 _RS08035 HMPREF1078_RS08040: HMPREF1078_RS08040 - winged helix DNA-binding domain-containing protein, at 170,637 to 171,707 _RS08040 HMPREF1078_RS08045: HMPREF1078_RS08045 - L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha, at 171,718 to 173,010 _RS08045 HMPREF1078_RS08050: HMPREF1078_RS08050 - membrane protein, at 173,178 to 173,468 _RS08050 HMPREF1078_RS08055: HMPREF1078_RS08055 - glycine zipper family protein, at 173,473 to 174,135 _RS08055 HMPREF1078_RS08060: HMPREF1078_RS08060 - AAA domain-containing protein, at 174,270 to 176,189 _RS08060 HMPREF1078_RS08065: HMPREF1078_RS08065 - Cof-type HAD-IIB family hydrolase, at 176,322 to 177,554 _RS08065 HMPREF1078_RS08070: HMPREF1078_RS08070 - isochorismate synthase, at 177,551 to 178,672 _RS08070
Locus Name Description Strand Phenotype
HMPREF1078_RS08020 HMPREF1078_RS08020 phosphatidylglycerol lysyltransferase domain-containing protein + sig.
HMPREF1078_RS08025 HMPREF1078_RS08025 GNAT family N-acetyltransferase + sig.
HMPREF1078_RS08030 HMPREF1078_RS08030 MATE family efflux transporter + insig.
HMPREF1078_RS08035 HMPREF1078_RS08035 magnesium transporter CorA family protein + strong
HMPREF1078_RS08040 HMPREF1078_RS08040 winged helix DNA-binding domain-containing protein - insig.
HMPREF1078_RS08045 HMPREF1078_RS08045 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha - strong
HMPREF1078_RS08050 HMPREF1078_RS08050 membrane protein + insig.
HMPREF1078_RS08055 HMPREF1078_RS08055 glycine zipper family protein - insig.
HMPREF1078_RS08060 HMPREF1078_RS08060 AAA domain-containing protein + insig.
HMPREF1078_RS08065 HMPREF1078_RS08065 Cof-type HAD-IIB family hydrolase + cofit
HMPREF1078_RS08070 HMPREF1078_RS08070 isochorismate synthase + insig.

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