Gene info for HMPREF1078_RS07880 in Parabacteroides merdae CL09T00C40

Annotation: MATE family efflux transporter
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, - strand, nucleotides 131,822 to 133,144
See nucleotide sequence around HMPREF1078_RS07880 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS07850 and HMPREF1078_RS07855 are separated by 149 nucleotidesHMPREF1078_RS07855 and HMPREF1078_RS07860 are separated by 562 nucleotidesHMPREF1078_RS07860 and HMPREF1078_RS07865 are separated by 62 nucleotidesHMPREF1078_RS07865 and HMPREF1078_RS07875 are separated by 477 nucleotidesHMPREF1078_RS07875 and HMPREF1078_RS07880 are separated by 14 nucleotidesHMPREF1078_RS07880 and HMPREF1078_RS07885 are separated by 125 nucleotidesHMPREF1078_RS07885 and HMPREF1078_RS07890 are separated by 92 nucleotidesHMPREF1078_RS07890 and HMPREF1078_RS07895 are separated by 472 nucleotidesHMPREF1078_RS07895 and HMPREF1078_RS07900 are separated by 42 nucleotidesHMPREF1078_RS07900 and HMPREF1078_RS07905 are separated by 232 nucleotides HMPREF1078_RS07850: HMPREF1078_RS07850 - AAA family ATPase, at 125,239 to 126,417 _RS07850 HMPREF1078_RS07855: HMPREF1078_RS07855 - branched-chain amino acid aminotransferase, at 126,567 to 127,586 _RS07855 HMPREF1078_RS07860: HMPREF1078_RS07860 - methylenetetrahydrofolate reductase [NAD(P)H], at 128,149 to 129,099 _RS07860 HMPREF1078_RS07865: HMPREF1078_RS07865 - asparaginase, at 129,162 to 130,205 _RS07865 HMPREF1078_RS07875: HMPREF1078_RS07875 - DNA polymerase III subunit delta, at 130,683 to 131,807 _RS07875 HMPREF1078_RS07880: HMPREF1078_RS07880 - MATE family efflux transporter, at 131,822 to 133,144 _RS07880 HMPREF1078_RS07885: HMPREF1078_RS07885 - hypothetical protein, at 133,270 to 134,268 _RS07885 HMPREF1078_RS07890: HMPREF1078_RS07890 - ABC-F family ATP-binding cassette domain-containing protein, at 134,361 to 135,977 _RS07890 HMPREF1078_RS07895: HMPREF1078_RS07895 - molecular chaperone DnaJ, at 136,450 to 137,607 _RS07895 HMPREF1078_RS07900: HMPREF1078_RS07900 - nucleotide exchange factor GrpE, at 137,650 to 138,252 _RS07900 HMPREF1078_RS07905: HMPREF1078_RS07905 - PDZ domain-containing protein, at 138,485 to 139,903 _RS07905
Locus Name Description Strand Phenotype
HMPREF1078_RS07850 HMPREF1078_RS07850 AAA family ATPase - strong
HMPREF1078_RS07855 HMPREF1078_RS07855 branched-chain amino acid aminotransferase - insig.
HMPREF1078_RS07860 HMPREF1078_RS07860 methylenetetrahydrofolate reductase [NAD(P)H] + insig.
HMPREF1078_RS07865 HMPREF1078_RS07865 asparaginase - insig.
HMPREF1078_RS07875 HMPREF1078_RS07875 DNA polymerase III subunit delta + no data
HMPREF1078_RS07880 HMPREF1078_RS07880 MATE family efflux transporter - insig.
HMPREF1078_RS07885 HMPREF1078_RS07885 hypothetical protein + strong
HMPREF1078_RS07890 HMPREF1078_RS07890 ABC-F family ATP-binding cassette domain-containing protein - insig.
HMPREF1078_RS07895 HMPREF1078_RS07895 molecular chaperone DnaJ - strong
HMPREF1078_RS07900 HMPREF1078_RS07900 nucleotide exchange factor GrpE - no data
HMPREF1078_RS07905 HMPREF1078_RS07905 PDZ domain-containing protein + insig.

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