Gene info for HMPREF1078_RS07855 in Parabacteroides merdae CL09T00C40

Annotation: branched-chain amino acid aminotransferase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, - strand, nucleotides 126,567 to 127,586
See nucleotide sequence around HMPREF1078_RS07855 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS07830 and HMPREF1078_RS07835 are separated by 109 nucleotidesHMPREF1078_RS07835 and HMPREF1078_RS07840 are separated by 81 nucleotidesHMPREF1078_RS07840 and HMPREF1078_RS07845 are separated by 208 nucleotidesHMPREF1078_RS07845 and HMPREF1078_RS07850 are separated by 30 nucleotidesHMPREF1078_RS07850 and HMPREF1078_RS07855 are separated by 149 nucleotidesHMPREF1078_RS07855 and HMPREF1078_RS07860 are separated by 562 nucleotidesHMPREF1078_RS07860 and HMPREF1078_RS07865 are separated by 62 nucleotidesHMPREF1078_RS07865 and HMPREF1078_RS07875 are separated by 477 nucleotidesHMPREF1078_RS07875 and HMPREF1078_RS07880 are separated by 14 nucleotidesHMPREF1078_RS07880 and HMPREF1078_RS07885 are separated by 125 nucleotides HMPREF1078_RS07830: HMPREF1078_RS07830 - porin, at 118,382 to 119,557 _RS07830 HMPREF1078_RS07835: HMPREF1078_RS07835 - DUF4852 domain-containing protein, at 119,667 to 120,707 _RS07835 HMPREF1078_RS07840: HMPREF1078_RS07840 - HD domain-containing protein, at 120,789 to 121,451 _RS07840 HMPREF1078_RS07845: HMPREF1078_RS07845 - pyruvate:ferredoxin (flavodoxin) oxidoreductase, at 121,660 to 125,208 _RS07845 HMPREF1078_RS07850: HMPREF1078_RS07850 - AAA family ATPase, at 125,239 to 126,417 _RS07850 HMPREF1078_RS07855: HMPREF1078_RS07855 - branched-chain amino acid aminotransferase, at 126,567 to 127,586 _RS07855 HMPREF1078_RS07860: HMPREF1078_RS07860 - methylenetetrahydrofolate reductase [NAD(P)H], at 128,149 to 129,099 _RS07860 HMPREF1078_RS07865: HMPREF1078_RS07865 - asparaginase, at 129,162 to 130,205 _RS07865 HMPREF1078_RS07875: HMPREF1078_RS07875 - DNA polymerase III subunit delta, at 130,683 to 131,807 _RS07875 HMPREF1078_RS07880: HMPREF1078_RS07880 - MATE family efflux transporter, at 131,822 to 133,144 _RS07880 HMPREF1078_RS07885: HMPREF1078_RS07885 - hypothetical protein, at 133,270 to 134,268 _RS07885
Locus Name Description Strand Phenotype
HMPREF1078_RS07830 HMPREF1078_RS07830 porin + insig.
HMPREF1078_RS07835 HMPREF1078_RS07835 DUF4852 domain-containing protein - insig.
HMPREF1078_RS07840 HMPREF1078_RS07840 HD domain-containing protein - insig.
HMPREF1078_RS07845 HMPREF1078_RS07845 pyruvate:ferredoxin (flavodoxin) oxidoreductase - strong
HMPREF1078_RS07850 HMPREF1078_RS07850 AAA family ATPase - strong
HMPREF1078_RS07855 HMPREF1078_RS07855 branched-chain amino acid aminotransferase - insig.
HMPREF1078_RS07860 HMPREF1078_RS07860 methylenetetrahydrofolate reductase [NAD(P)H] + insig.
HMPREF1078_RS07865 HMPREF1078_RS07865 asparaginase - insig.
HMPREF1078_RS07875 HMPREF1078_RS07875 DNA polymerase III subunit delta + no data
HMPREF1078_RS07880 HMPREF1078_RS07880 MATE family efflux transporter - insig.
HMPREF1078_RS07885 HMPREF1078_RS07885 hypothetical protein + strong

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