Gene info for HMPREF1078_RS07795 in Parabacteroides merdae CL09T00C40

Annotation: SusC/RagA family TonB-linked outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, - strand, nucleotides 104,869 to 108,042
See nucleotide sequence around HMPREF1078_RS07795 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS07770 and HMPREF1078_RS07775 are separated by 96 nucleotidesHMPREF1078_RS07775 and HMPREF1078_RS07780 are separated by 3 nucleotidesHMPREF1078_RS07780 and HMPREF1078_RS07785 are separated by 141 nucleotidesHMPREF1078_RS07785 and HMPREF1078_RS07790 are separated by 76 nucleotidesHMPREF1078_RS07790 and HMPREF1078_RS07795 are separated by 46 nucleotidesHMPREF1078_RS07795 and HMPREF1078_RS19545 are separated by 263 nucleotidesHMPREF1078_RS19545 and HMPREF1078_RS19855 are separated by 231 nucleotidesHMPREF1078_RS19855 and HMPREF1078_RS07805 are separated by 730 nucleotidesHMPREF1078_RS07805 and HMPREF1078_RS07810 are separated by 16 nucleotidesHMPREF1078_RS07810 and HMPREF1078_RS07815 are separated by 534 nucleotides HMPREF1078_RS07770: HMPREF1078_RS07770 - GH92 family glycosyl hydrolase, at 98,411 to 100,633 _RS07770 HMPREF1078_RS07775: HMPREF1078_RS07775 - twin-arginine translocase subunit TatC, at 100,730 to 101,605 _RS07775 HMPREF1078_RS07780: HMPREF1078_RS07780 - twin-arginine translocase TatA/TatE family subunit, at 101,609 to 101,803 _RS07780 HMPREF1078_RS07785: HMPREF1078_RS07785 - ACP S-malonyltransferase, at 101,945 to 102,826 _RS07785 HMPREF1078_RS07790: HMPREF1078_RS07790 - SusD/RagB family nutrient-binding outer membrane lipoprotein, at 102,903 to 104,822 _RS07790 HMPREF1078_RS07795: HMPREF1078_RS07795 - SusC/RagA family TonB-linked outer membrane protein, at 104,869 to 108,042 _RS07795 HMPREF1078_RS19545: HMPREF1078_RS19545 - RagB/SusD family nutrient uptake outer membrane protein, at 108,306 to 108,571 _RS19545 HMPREF1078_RS19855: HMPREF1078_RS19855 - hypothetical protein, at 108,803 to 109,046 _RS19855 HMPREF1078_RS07805: HMPREF1078_RS07805 - TonB-dependent receptor, at 109,777 to 112,998 _RS07805 HMPREF1078_RS07810: HMPREF1078_RS07810 - RagB/SusD family nutrient uptake outer membrane protein, at 113,015 to 114,778 _RS07810 HMPREF1078_RS07815: HMPREF1078_RS07815 - M20/M25/M40 family metallo-hydrolase, at 115,313 to 116,311 _RS07815
Locus Name Description Strand Phenotype
HMPREF1078_RS07770 HMPREF1078_RS07770 GH92 family glycosyl hydrolase - cofit
HMPREF1078_RS07775 HMPREF1078_RS07775 twin-arginine translocase subunit TatC - strong
HMPREF1078_RS07780 HMPREF1078_RS07780 twin-arginine translocase TatA/TatE family subunit - cofit
HMPREF1078_RS07785 HMPREF1078_RS07785 ACP S-malonyltransferase + no data
HMPREF1078_RS07790 HMPREF1078_RS07790 SusD/RagB family nutrient-binding outer membrane lipoprotein - insig.
HMPREF1078_RS07795 HMPREF1078_RS07795 SusC/RagA family TonB-linked outer membrane protein - cofit
HMPREF1078_RS19545 HMPREF1078_RS19545 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1078_RS19855 HMPREF1078_RS19855 hypothetical protein - insig.
HMPREF1078_RS07805 HMPREF1078_RS07805 TonB-dependent receptor + strong
HMPREF1078_RS07810 HMPREF1078_RS07810 RagB/SusD family nutrient uptake outer membrane protein + strong
HMPREF1078_RS07815 HMPREF1078_RS07815 M20/M25/M40 family metallo-hydrolase - insig.

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