Gene info for HMPREF1078_RS07680 in Parabacteroides merdae CL09T00C40

Annotation: TolC family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, + strand, nucleotides 74,633 to 76,036
See nucleotide sequence around HMPREF1078_RS07680 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS07655 and HMPREF1078_RS07660 are separated by 246 nucleotidesHMPREF1078_RS07660 and HMPREF1078_RS07665 are separated by 173 nucleotidesHMPREF1078_RS07665 and HMPREF1078_RS07670 are separated by 141 nucleotidesHMPREF1078_RS07670 and HMPREF1078_RS07675 overlap by 46 nucleotidesHMPREF1078_RS07675 and HMPREF1078_RS07680 are separated by 132 nucleotidesHMPREF1078_RS07680 and HMPREF1078_RS07685 are separated by 28 nucleotidesHMPREF1078_RS07685 and HMPREF1078_RS07690 are separated by 6 nucleotidesHMPREF1078_RS07690 and HMPREF1078_RS07695 are separated by 121 nucleotidesHMPREF1078_RS07695 and HMPREF1078_RS07700 are separated by 3 nucleotidesHMPREF1078_RS07700 and HMPREF1078_RS07705 are separated by 33 nucleotides HMPREF1078_RS07655: HMPREF1078_RS07655 - TonB-dependent receptor, at 67,246 to 69,549 _RS07655 HMPREF1078_RS07660: HMPREF1078_RS07660 - hypothetical protein, at 69,796 to 70,149 _RS07660 HMPREF1078_RS07665: HMPREF1078_RS07665 - NADP-dependent malic enzyme, at 70,323 to 72,608 _RS07665 HMPREF1078_RS07670: HMPREF1078_RS07670 - MATE family efflux transporter, at 72,750 to 74,144 _RS07670 HMPREF1078_RS07675: HMPREF1078_RS07675 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 74,099 to 74,500 _RS07675 HMPREF1078_RS07680: HMPREF1078_RS07680 - TolC family protein, at 74,633 to 76,036 _RS07680 HMPREF1078_RS07685: HMPREF1078_RS07685 - efflux RND transporter periplasmic adaptor subunit, at 76,065 to 77,180 _RS07685 HMPREF1078_RS07690: HMPREF1078_RS07690 - multidrug efflux RND transporter permease subunit, at 77,187 to 80,309 _RS07690 HMPREF1078_RS07695: HMPREF1078_RS07695 - methionyl-tRNA formyltransferase, at 80,431 to 81,405 _RS07695 HMPREF1078_RS07700: HMPREF1078_RS07700 - chloride channel protein, at 81,409 to 83,217 _RS07700 HMPREF1078_RS07705: HMPREF1078_RS07705 - sugar transferase, at 83,251 to 84,651 _RS07705
Locus Name Description Strand Phenotype
HMPREF1078_RS07655 HMPREF1078_RS07655 TonB-dependent receptor - strong
HMPREF1078_RS07660 HMPREF1078_RS07660 hypothetical protein - strong
HMPREF1078_RS07665 HMPREF1078_RS07665 NADP-dependent malic enzyme + strong
HMPREF1078_RS07670 HMPREF1078_RS07670 MATE family efflux transporter + strong
HMPREF1078_RS07675 HMPREF1078_RS07675 FKBP-type peptidyl-prolyl cis-trans isomerase - cofit
HMPREF1078_RS07680 HMPREF1078_RS07680 TolC family protein + insig.
HMPREF1078_RS07685 HMPREF1078_RS07685 efflux RND transporter periplasmic adaptor subunit + insig.
HMPREF1078_RS07690 HMPREF1078_RS07690 multidrug efflux RND transporter permease subunit + insig.
HMPREF1078_RS07695 HMPREF1078_RS07695 methionyl-tRNA formyltransferase - no data
HMPREF1078_RS07700 HMPREF1078_RS07700 chloride channel protein - strong
HMPREF1078_RS07705 HMPREF1078_RS07705 sugar transferase - strong

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