Gene info for HMPREF1078_RS07645 in Parabacteroides merdae CL09T00C40

Annotation: ribosome biogenesis GTP-binding protein YihA/YsxC
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, + strand, nucleotides 66,092 to 66,688
See nucleotide sequence around HMPREF1078_RS07645 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS07615 and HMPREF1078_RS07620 are separated by 259 nucleotidesHMPREF1078_RS07620 and HMPREF1078_RS07625 are separated by 74 nucleotidesHMPREF1078_RS07625 and HMPREF1078_RS18620 are separated by 894 nucleotidesHMPREF1078_RS18620 and HMPREF1078_RS07640 are separated by 342 nucleotidesHMPREF1078_RS07640 and HMPREF1078_RS07645 are separated by 65 nucleotidesHMPREF1078_RS07645 and HMPREF1078_RS07650 are separated by 256 nucleotidesHMPREF1078_RS07650 and HMPREF1078_RS07655 are separated by 118 nucleotidesHMPREF1078_RS07655 and HMPREF1078_RS07660 are separated by 246 nucleotidesHMPREF1078_RS07660 and HMPREF1078_RS07665 are separated by 173 nucleotidesHMPREF1078_RS07665 and HMPREF1078_RS07670 are separated by 141 nucleotides HMPREF1078_RS07615: HMPREF1078_RS07615 - recombination mediator RecR, at 58,592 to 59,215 _RS07615 HMPREF1078_RS07620: HMPREF1078_RS07620 - oligopeptide transporter, OPT family, at 59,475 to 61,475 _RS07620 HMPREF1078_RS07625: HMPREF1078_RS07625 - SpoIID/LytB domain-containing protein, at 61,550 to 62,863 _RS07625 HMPREF1078_RS18620: HMPREF1078_RS18620 - transposase, at 63,758 to 64,202 _RS18620 HMPREF1078_RS07640: HMPREF1078_RS07640 - sodium:solute symporter, at 64,545 to 66,026 _RS07640 HMPREF1078_RS07645: HMPREF1078_RS07645 - ribosome biogenesis GTP-binding protein YihA/YsxC, at 66,092 to 66,688 _RS07645 HMPREF1078_RS07650: HMPREF1078_RS07650 - hypothetical protein, at 66,945 to 67,127 _RS07650 HMPREF1078_RS07655: HMPREF1078_RS07655 - TonB-dependent receptor, at 67,246 to 69,549 _RS07655 HMPREF1078_RS07660: HMPREF1078_RS07660 - hypothetical protein, at 69,796 to 70,149 _RS07660 HMPREF1078_RS07665: HMPREF1078_RS07665 - NADP-dependent malic enzyme, at 70,323 to 72,608 _RS07665 HMPREF1078_RS07670: HMPREF1078_RS07670 - MATE family efflux transporter, at 72,750 to 74,144 _RS07670
Locus Name Description Strand Phenotype
HMPREF1078_RS07615 HMPREF1078_RS07615 recombination mediator RecR - strong
HMPREF1078_RS07620 HMPREF1078_RS07620 oligopeptide transporter, OPT family + insig.
HMPREF1078_RS07625 HMPREF1078_RS07625 SpoIID/LytB domain-containing protein + insig.
HMPREF1078_RS18620 HMPREF1078_RS18620 transposase - no data
HMPREF1078_RS07640 HMPREF1078_RS07640 sodium:solute symporter + insig.
HMPREF1078_RS07645 HMPREF1078_RS07645 ribosome biogenesis GTP-binding protein YihA/YsxC + no data
HMPREF1078_RS07650 HMPREF1078_RS07650 hypothetical protein + insig.
HMPREF1078_RS07655 HMPREF1078_RS07655 TonB-dependent receptor - strong
HMPREF1078_RS07660 HMPREF1078_RS07660 hypothetical protein - strong
HMPREF1078_RS07665 HMPREF1078_RS07665 NADP-dependent malic enzyme + strong
HMPREF1078_RS07670 HMPREF1078_RS07670 MATE family efflux transporter + strong

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