Gene info for HMPREF1078_RS07450 in Parabacteroides merdae CL09T00C40

Annotation: cobalt-precorrin-5B (C(1))-methyltransferase CbiD
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, + strand, nucleotides 17,676 to 19,520
See nucleotide sequence around HMPREF1078_RS07450 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS07425 and HMPREF1078_RS07430 are separated by 176 nucleotidesHMPREF1078_RS07430 and HMPREF1078_RS07435 are separated by 47 nucleotidesHMPREF1078_RS07435 and HMPREF1078_RS07440 overlap by 4 nucleotidesHMPREF1078_RS07440 and HMPREF1078_RS07445 overlap by 8 nucleotidesHMPREF1078_RS07445 and HMPREF1078_RS07450 are separated by 164 nucleotidesHMPREF1078_RS07450 and HMPREF1078_RS07455 are separated by 0 nucleotidesHMPREF1078_RS07455 and HMPREF1078_RS07460 are separated by 131 nucleotidesHMPREF1078_RS07460 and HMPREF1078_RS07465 overlap by 1 nucleotidesHMPREF1078_RS07465 and HMPREF1078_RS07470 are separated by 9 nucleotidesHMPREF1078_RS07470 and HMPREF1078_RS07475 are separated by 300 nucleotides HMPREF1078_RS07425: HMPREF1078_RS07425 - DUF1080 domain-containing protein, at 10,371 to 11,024 _RS07425 HMPREF1078_RS07430: HMPREF1078_RS07430 - AMP-binding protein, at 11,201 to 12,865 _RS07430 HMPREF1078_RS07435: HMPREF1078_RS07435 - precorrin-3B C(17)-methyltransferase, at 12,913 to 14,325 _RS07435 HMPREF1078_RS07440: HMPREF1078_RS07440 - precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE, at 14,322 to 15,581 _RS07440 HMPREF1078_RS07445: HMPREF1078_RS07445 - precorrin-4 C(11)-methyltransferase, at 15,574 to 17,511 _RS07445 HMPREF1078_RS07450: HMPREF1078_RS07450 - cobalt-precorrin-5B (C(1))-methyltransferase CbiD, at 17,676 to 19,520 _RS07450 HMPREF1078_RS07455: HMPREF1078_RS07455 - hypothetical protein, at 19,521 to 20,195 _RS07455 HMPREF1078_RS07460: HMPREF1078_RS07460 - ABC transporter ATP-binding protein, at 20,327 to 21,334 _RS07460 HMPREF1078_RS07465: HMPREF1078_RS07465 - iron ABC transporter permease, at 21,334 to 22,371 _RS07465 HMPREF1078_RS07470: HMPREF1078_RS07470 - ABC transporter substrate-binding protein, at 22,381 to 23,541 _RS07470 HMPREF1078_RS07475: HMPREF1078_RS07475 - hypothetical protein, at 23,842 to 24,201 _RS07475
Locus Name Description Strand Phenotype
HMPREF1078_RS07425 HMPREF1078_RS07425 DUF1080 domain-containing protein + insig.
HMPREF1078_RS07430 HMPREF1078_RS07430 AMP-binding protein + strong
HMPREF1078_RS07435 HMPREF1078_RS07435 precorrin-3B C(17)-methyltransferase + strong
HMPREF1078_RS07440 HMPREF1078_RS07440 precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE + sig.
HMPREF1078_RS07445 HMPREF1078_RS07445 precorrin-4 C(11)-methyltransferase + strong
HMPREF1078_RS07450 HMPREF1078_RS07450 cobalt-precorrin-5B (C(1))-methyltransferase CbiD + strong
HMPREF1078_RS07455 HMPREF1078_RS07455 hypothetical protein - insig.
HMPREF1078_RS07460 HMPREF1078_RS07460 ABC transporter ATP-binding protein - insig.
HMPREF1078_RS07465 HMPREF1078_RS07465 iron ABC transporter permease - insig.
HMPREF1078_RS07470 HMPREF1078_RS07470 ABC transporter substrate-binding protein - cofit
HMPREF1078_RS07475 HMPREF1078_RS07475 hypothetical protein - insig.

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