Gene info for HMPREF1078_RS07400 in Parabacteroides merdae CL09T00C40

Annotation: helix-turn-helix domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976526, + strand, nucleotides 5,457 to 5,993
See nucleotide sequence around HMPREF1078_RS07400 or for all of scaffold NZ_JH976526

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS18600 and HMPREF1078_RS19840 are separated by 228 nucleotidesHMPREF1078_RS19840 and HMPREF1078_RS19845 are separated by 60 nucleotidesHMPREF1078_RS19845 and HMPREF1078_RS07390 are separated by 0 nucleotidesHMPREF1078_RS07390 and HMPREF1078_RS07395 are separated by 126 nucleotidesHMPREF1078_RS07395 and HMPREF1078_RS07400 are separated by 351 nucleotidesHMPREF1078_RS07400 and HMPREF1078_RS07405 are separated by 83 nucleotidesHMPREF1078_RS07405 and HMPREF1078_RS07410 are separated by 238 nucleotidesHMPREF1078_RS07410 and HMPREF1078_RS19850 are separated by 63 nucleotidesHMPREF1078_RS19850 and HMPREF1078_RS07420 are separated by 329 nucleotidesHMPREF1078_RS07420 and HMPREF1078_RS07425 are separated by 28 nucleotides HMPREF1078_RS18600: HMPREF1078_RS18600 - helix-turn-helix domain-containing protein, at 1,269 to 1,581 _RS18600 HMPREF1078_RS19840: HMPREF1078_RS19840 - hypothetical protein, at 1,810 to 2,121 _RS19840 HMPREF1078_RS19845: HMPREF1078_RS19845 - LuxR C-terminal-related transcriptional regulator, at 2,182 to 2,574 _RS19845 HMPREF1078_RS07390: HMPREF1078_RS07390 - phosphoglycerate mutase family protein, at 2,575 to 3,168 _RS07390 HMPREF1078_RS07395: HMPREF1078_RS07395 - '3'-5' exonuclease' pseudo=_no_value transl_table=11, at 3,295 to 5,105 _RS07395 HMPREF1078_RS07400: HMPREF1078_RS07400 - helix-turn-helix domain-containing protein, at 5,457 to 5,993 _RS07400 HMPREF1078_RS07405: HMPREF1078_RS07405 - DinB family protein, at 6,077 to 6,550 _RS07405 HMPREF1078_RS07410: HMPREF1078_RS07410 - MATE family efflux transporter, at 6,789 to 8,081 _RS07410 HMPREF1078_RS19850: HMPREF1078_RS19850 - clindamycin resistance transfer factor BtgA, at 8,145 to 8,324 _RS19850 HMPREF1078_RS07420: HMPREF1078_RS07420 - energy-dependent translational throttle protein EttA, at 8,654 to 10,342 _RS07420 HMPREF1078_RS07425: HMPREF1078_RS07425 - DUF1080 domain-containing protein, at 10,371 to 11,024 _RS07425
Locus Name Description Strand Phenotype
HMPREF1078_RS18600 HMPREF1078_RS18600 helix-turn-helix domain-containing protein - insig.
HMPREF1078_RS19840 HMPREF1078_RS19840 hypothetical protein + insig.
HMPREF1078_RS19845 HMPREF1078_RS19845 LuxR C-terminal-related transcriptional regulator + insig.
HMPREF1078_RS07390 HMPREF1078_RS07390 phosphoglycerate mutase family protein - insig.
HMPREF1078_RS07395 HMPREF1078_RS07395 '3'-5' exonuclease' pseudo=_no_value transl_table=11 + insig.
HMPREF1078_RS07400 HMPREF1078_RS07400 helix-turn-helix domain-containing protein + sig.
HMPREF1078_RS07405 HMPREF1078_RS07405 DinB family protein + insig.
HMPREF1078_RS07410 HMPREF1078_RS07410 MATE family efflux transporter + insig.
HMPREF1078_RS19850 HMPREF1078_RS19850 clindamycin resistance transfer factor BtgA + insig.
HMPREF1078_RS07420 HMPREF1078_RS07420 energy-dependent translational throttle protein EttA + sig.
HMPREF1078_RS07425 HMPREF1078_RS07425 DUF1080 domain-containing protein + insig.

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