Gene info for HMPREF1078_RS07340 in Parabacteroides merdae CL09T00C40

Annotation: slipin family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 897,967 to 898,590
See nucleotide sequence around HMPREF1078_RS07340 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS07315 and HMPREF1078_RS07320 are separated by 106 nucleotidesHMPREF1078_RS07320 and HMPREF1078_RS07325 are separated by 28 nucleotidesHMPREF1078_RS07325 and HMPREF1078_RS07330 are separated by 175 nucleotidesHMPREF1078_RS07330 and HMPREF1078_RS07335 are separated by 128 nucleotidesHMPREF1078_RS07335 and HMPREF1078_RS07340 are separated by 31 nucleotidesHMPREF1078_RS07340 and HMPREF1078_RS19835 overlap by 17 nucleotidesHMPREF1078_RS19835 and HMPREF1078_RS07350 are separated by 2 nucleotidesHMPREF1078_RS07350 and HMPREF1078_RS07355 are separated by 137 nucleotidesHMPREF1078_RS07355 and HMPREF1078_RS07360 overlap by 17 nucleotidesHMPREF1078_RS07360 and HMPREF1078_RS07365 are separated by 75 nucleotides HMPREF1078_RS07315: HMPREF1078_RS07315 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 892,636 to 893,802 _RS07315 HMPREF1078_RS07320: HMPREF1078_RS07320 - Gfo/Idh/MocA family oxidoreductase, at 893,909 to 894,925 _RS07320 HMPREF1078_RS07325: HMPREF1078_RS07325 - Lrp/AsnC family transcriptional regulator, at 894,954 to 895,424 _RS07325 HMPREF1078_RS07330: HMPREF1078_RS07330 - O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase, at 895,600 to 896,889 _RS07330 HMPREF1078_RS07335: HMPREF1078_RS07335 - hypothetical protein, at 897,018 to 897,935 _RS07335 HMPREF1078_RS07340: HMPREF1078_RS07340 - slipin family protein, at 897,967 to 898,590 _RS07340 HMPREF1078_RS19835: HMPREF1078_RS19835 - hypothetical protein, at 898,574 to 898,855 _RS19835 HMPREF1078_RS07350: HMPREF1078_RS07350 - GntR family transcriptional regulator, at 898,858 to 899,241 _RS07350 HMPREF1078_RS07355: HMPREF1078_RS07355 - hypothetical protein, at 899,379 to 899,735 _RS07355 HMPREF1078_RS07360: HMPREF1078_RS07360 - IS66 family insertion sequence element accessory protein TnpB, at 899,719 to 900,087 _RS07360 HMPREF1078_RS07365: HMPREF1078_RS07365 - IS66-like element ISBvu3 family transposase, at 900,163 to 901,776 _RS07365
Locus Name Description Strand Phenotype
HMPREF1078_RS07315 HMPREF1078_RS07315 DegT/DnrJ/EryC1/StrS family aminotransferase + strong
HMPREF1078_RS07320 HMPREF1078_RS07320 Gfo/Idh/MocA family oxidoreductase + strong
HMPREF1078_RS07325 HMPREF1078_RS07325 Lrp/AsnC family transcriptional regulator - insig.
HMPREF1078_RS07330 HMPREF1078_RS07330 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase + insig.
HMPREF1078_RS07335 HMPREF1078_RS07335 hypothetical protein - insig.
HMPREF1078_RS07340 HMPREF1078_RS07340 slipin family protein - insig.
HMPREF1078_RS19835 HMPREF1078_RS19835 hypothetical protein - insig.
HMPREF1078_RS07350 HMPREF1078_RS07350 GntR family transcriptional regulator - insig.
HMPREF1078_RS07355 HMPREF1078_RS07355 hypothetical protein + no data
HMPREF1078_RS07360 HMPREF1078_RS07360 IS66 family insertion sequence element accessory protein TnpB + no data
HMPREF1078_RS07365 HMPREF1078_RS07365 IS66-like element ISBvu3 family transposase + no data

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