Gene info for HMPREF1078_RS07100 in Parabacteroides merdae CL09T00C40

Annotation: DUF4925 domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 838,583 to 839,773
See nucleotide sequence around HMPREF1078_RS07100 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS07075 and HMPREF1078_RS07080 are separated by 43 nucleotidesHMPREF1078_RS07080 and HMPREF1078_RS07085 are separated by 21 nucleotidesHMPREF1078_RS07085 and HMPREF1078_RS07090 are separated by 154 nucleotidesHMPREF1078_RS07090 and HMPREF1078_RS07095 are separated by 9 nucleotidesHMPREF1078_RS07095 and HMPREF1078_RS07100 are separated by 11 nucleotidesHMPREF1078_RS07100 and HMPREF1078_RS07105 are separated by 156 nucleotidesHMPREF1078_RS07105 and HMPREF1078_RS19145 are separated by 10 nucleotidesHMPREF1078_RS19145 and HMPREF1078_RS19150 are separated by 18 nucleotidesHMPREF1078_RS19150 and HMPREF1078_RS07120 are separated by 35 nucleotidesHMPREF1078_RS07120 and HMPREF1078_RS07125 are separated by 859 nucleotides HMPREF1078_RS07075: HMPREF1078_RS07075 - ribonuclease III, at 832,735 to 833,598 _RS07075 HMPREF1078_RS07080: HMPREF1078_RS07080 - beta-ketoacyl-ACP synthase II, at 833,642 to 834,907 _RS07080 HMPREF1078_RS07085: HMPREF1078_RS07085 - acyl carrier protein, at 834,929 to 835,165 _RS07085 HMPREF1078_RS07090: HMPREF1078_RS07090 - phosphoribosylglycinamide formyltransferase, at 835,320 to 835,892 _RS07090 HMPREF1078_RS07095: HMPREF1078_RS07095 - TonB-dependent receptor, at 835,902 to 838,571 _RS07095 HMPREF1078_RS07100: HMPREF1078_RS07100 - DUF4925 domain-containing protein, at 838,583 to 839,773 _RS07100 HMPREF1078_RS07105: HMPREF1078_RS07105 - helix-turn-helix domain-containing protein, at 839,930 to 840,781 _RS07105 HMPREF1078_RS19145: HMPREF1078_RS19145 - MFS transporter, at 840,792 to 841,991 _RS19145 HMPREF1078_RS19150: HMPREF1078_RS19150 - 4-phosphoerythronate dehydrogenase PdxB, at 842,010 to 843,122 _RS19150 HMPREF1078_RS07120: HMPREF1078_RS07120 - hypothetical protein, at 843,158 to 844,012 _RS07120 HMPREF1078_RS07125: HMPREF1078_RS07125 - carboxypeptidase regulatory-like domain-containing protein, at 844,872 to 847,364 _RS07125
Locus Name Description Strand Phenotype
HMPREF1078_RS07075 HMPREF1078_RS07075 ribonuclease III - cofit
HMPREF1078_RS07080 HMPREF1078_RS07080 beta-ketoacyl-ACP synthase II - no data
HMPREF1078_RS07085 HMPREF1078_RS07085 acyl carrier protein - no data
HMPREF1078_RS07090 HMPREF1078_RS07090 phosphoribosylglycinamide formyltransferase + insig.
HMPREF1078_RS07095 HMPREF1078_RS07095 TonB-dependent receptor - insig.
HMPREF1078_RS07100 HMPREF1078_RS07100 DUF4925 domain-containing protein - insig.
HMPREF1078_RS07105 HMPREF1078_RS07105 helix-turn-helix domain-containing protein + insig.
HMPREF1078_RS19145 HMPREF1078_RS19145 MFS transporter - insig.
HMPREF1078_RS19150 HMPREF1078_RS19150 4-phosphoerythronate dehydrogenase PdxB - strong
HMPREF1078_RS07120 HMPREF1078_RS07120 hypothetical protein - insig.
HMPREF1078_RS07125 HMPREF1078_RS07125 carboxypeptidase regulatory-like domain-containing protein - insig.

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