Gene info for HMPREF1078_RS06985 in Parabacteroides merdae CL09T00C40

Annotation: family 20 glycosylhydrolase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, + strand, nucleotides 805,418 to 807,391
See nucleotide sequence around HMPREF1078_RS06985 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS06960 and HMPREF1078_RS06965 are separated by 3 nucleotidesHMPREF1078_RS06965 and HMPREF1078_RS06970 are separated by 118 nucleotidesHMPREF1078_RS06970 and HMPREF1078_RS06975 are separated by 56 nucleotidesHMPREF1078_RS06975 and HMPREF1078_RS06980 are separated by 70 nucleotidesHMPREF1078_RS06980 and HMPREF1078_RS06985 are separated by 145 nucleotidesHMPREF1078_RS06985 and HMPREF1078_RS06990 are separated by 187 nucleotidesHMPREF1078_RS06990 and HMPREF1078_RS06995 are separated by 96 nucleotidesHMPREF1078_RS06995 and HMPREF1078_RS07000 are separated by 6 nucleotidesHMPREF1078_RS07000 and HMPREF1078_RS07005 are separated by 51 nucleotidesHMPREF1078_RS07005 and HMPREF1078_RS07010 are separated by 115 nucleotides HMPREF1078_RS06960: HMPREF1078_RS06960 - endonuclease/exonuclease/phosphatase family protein, at 800,613 to 801,491 _RS06960 HMPREF1078_RS06965: HMPREF1078_RS06965 - helix-hairpin-helix domain-containing protein, at 801,495 to 802,265 _RS06965 HMPREF1078_RS06970: HMPREF1078_RS06970 - sodium-dependent transporter, at 802,384 to 803,751 _RS06970 HMPREF1078_RS06975: HMPREF1078_RS06975 - ABC transporter ATP-binding protein, at 803,808 to 804,476 _RS06975 HMPREF1078_RS06980: HMPREF1078_RS06980 - tRNA threonylcarbamoyladenosine dehydratase, at 804,547 to 805,272 _RS06980 HMPREF1078_RS06985: HMPREF1078_RS06985 - family 20 glycosylhydrolase, at 805,418 to 807,391 _RS06985 HMPREF1078_RS06990: HMPREF1078_RS06990 - hypothetical protein, at 807,579 to 807,905 _RS06990 HMPREF1078_RS06995: HMPREF1078_RS06995 - FAD-dependent oxidoreductase, at 808,002 to 809,864 _RS06995 HMPREF1078_RS07000: HMPREF1078_RS07000 - FAD-dependent oxidoreductase, at 809,871 to 812,873 _RS07000 HMPREF1078_RS07005: HMPREF1078_RS07005 - FAD-dependent oxidoreductase, at 812,925 to 814,925 _RS07005 HMPREF1078_RS07010: HMPREF1078_RS07010 - RagB/SusD family nutrient uptake outer membrane protein, at 815,041 to 816,879 _RS07010
Locus Name Description Strand Phenotype
HMPREF1078_RS06960 HMPREF1078_RS06960 endonuclease/exonuclease/phosphatase family protein + insig.
HMPREF1078_RS06965 HMPREF1078_RS06965 helix-hairpin-helix domain-containing protein - insig.
HMPREF1078_RS06970 HMPREF1078_RS06970 sodium-dependent transporter - cofit
HMPREF1078_RS06975 HMPREF1078_RS06975 ABC transporter ATP-binding protein - no data
HMPREF1078_RS06980 HMPREF1078_RS06980 tRNA threonylcarbamoyladenosine dehydratase - cofit
HMPREF1078_RS06985 HMPREF1078_RS06985 family 20 glycosylhydrolase + insig.
HMPREF1078_RS06990 HMPREF1078_RS06990 hypothetical protein + insig.
HMPREF1078_RS06995 HMPREF1078_RS06995 FAD-dependent oxidoreductase - insig.
HMPREF1078_RS07000 HMPREF1078_RS07000 FAD-dependent oxidoreductase - insig.
HMPREF1078_RS07005 HMPREF1078_RS07005 FAD-dependent oxidoreductase - insig.
HMPREF1078_RS07010 HMPREF1078_RS07010 RagB/SusD family nutrient uptake outer membrane protein - insig.

Or browse nearby genes

Or see the comparative fitness browser