Gene info for HMPREF1078_RS06965 in Parabacteroides merdae CL09T00C40

Annotation: helix-hairpin-helix domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 801,495 to 802,265
See nucleotide sequence around HMPREF1078_RS06965 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS06940 and HMPREF1078_RS06945 overlap by 23 nucleotidesHMPREF1078_RS06945 and HMPREF1078_RS06950 are separated by 105 nucleotidesHMPREF1078_RS06950 and HMPREF1078_RS06955 are separated by 19 nucleotidesHMPREF1078_RS06955 and HMPREF1078_RS06960 are separated by 26 nucleotidesHMPREF1078_RS06960 and HMPREF1078_RS06965 are separated by 3 nucleotidesHMPREF1078_RS06965 and HMPREF1078_RS06970 are separated by 118 nucleotidesHMPREF1078_RS06970 and HMPREF1078_RS06975 are separated by 56 nucleotidesHMPREF1078_RS06975 and HMPREF1078_RS06980 are separated by 70 nucleotidesHMPREF1078_RS06980 and HMPREF1078_RS06985 are separated by 145 nucleotidesHMPREF1078_RS06985 and HMPREF1078_RS06990 are separated by 187 nucleotides HMPREF1078_RS06940: HMPREF1078_RS06940 - hypothetical protein, at 794,285 to 795,067 _RS06940 HMPREF1078_RS06945: HMPREF1078_RS06945 - DUF3037 domain-containing protein, at 795,045 to 795,428 _RS06945 HMPREF1078_RS06950: HMPREF1078_RS06950 - TonB-dependent receptor, at 795,534 to 798,812 _RS06950 HMPREF1078_RS06955: HMPREF1078_RS06955 - RagB/SusD family nutrient uptake outer membrane protein, at 798,832 to 800,586 _RS06955 HMPREF1078_RS06960: HMPREF1078_RS06960 - endonuclease/exonuclease/phosphatase family protein, at 800,613 to 801,491 _RS06960 HMPREF1078_RS06965: HMPREF1078_RS06965 - helix-hairpin-helix domain-containing protein, at 801,495 to 802,265 _RS06965 HMPREF1078_RS06970: HMPREF1078_RS06970 - sodium-dependent transporter, at 802,384 to 803,751 _RS06970 HMPREF1078_RS06975: HMPREF1078_RS06975 - ABC transporter ATP-binding protein, at 803,808 to 804,476 _RS06975 HMPREF1078_RS06980: HMPREF1078_RS06980 - tRNA threonylcarbamoyladenosine dehydratase, at 804,547 to 805,272 _RS06980 HMPREF1078_RS06985: HMPREF1078_RS06985 - family 20 glycosylhydrolase, at 805,418 to 807,391 _RS06985 HMPREF1078_RS06990: HMPREF1078_RS06990 - hypothetical protein, at 807,579 to 807,905 _RS06990
Locus Name Description Strand Phenotype
HMPREF1078_RS06940 HMPREF1078_RS06940 hypothetical protein + insig.
HMPREF1078_RS06945 HMPREF1078_RS06945 DUF3037 domain-containing protein + strong
HMPREF1078_RS06950 HMPREF1078_RS06950 TonB-dependent receptor + cofit
HMPREF1078_RS06955 HMPREF1078_RS06955 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1078_RS06960 HMPREF1078_RS06960 endonuclease/exonuclease/phosphatase family protein + insig.
HMPREF1078_RS06965 HMPREF1078_RS06965 helix-hairpin-helix domain-containing protein - insig.
HMPREF1078_RS06970 HMPREF1078_RS06970 sodium-dependent transporter - cofit
HMPREF1078_RS06975 HMPREF1078_RS06975 ABC transporter ATP-binding protein - no data
HMPREF1078_RS06980 HMPREF1078_RS06980 tRNA threonylcarbamoyladenosine dehydratase - cofit
HMPREF1078_RS06985 HMPREF1078_RS06985 family 20 glycosylhydrolase + insig.
HMPREF1078_RS06990 HMPREF1078_RS06990 hypothetical protein + insig.

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