Gene info for HMPREF1078_RS06535 in Parabacteroides merdae CL09T00C40

Annotation: helix-hairpin-helix domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 690,787 to 692,724
See nucleotide sequence around HMPREF1078_RS06535 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS06515 and HMPREF1078_RS19535 are separated by 85 nucleotidesHMPREF1078_RS19535 and HMPREF1078_RS19800 are separated by 164 nucleotidesHMPREF1078_RS19800 and HMPREF1078_RS19805 overlap by 11 nucleotidesHMPREF1078_RS19805 and HMPREF1078_RS06530 are separated by 72 nucleotidesHMPREF1078_RS06530 and HMPREF1078_RS06535 are separated by 86 nucleotidesHMPREF1078_RS06535 and HMPREF1078_RS06540 are separated by 102 nucleotidesHMPREF1078_RS06540 and HMPREF1078_RS06545 are separated by 242 nucleotidesHMPREF1078_RS06545 and HMPREF1078_RS06550 overlap by 9 nucleotidesHMPREF1078_RS06550 and HMPREF1078_RS06555 are separated by 754 nucleotidesHMPREF1078_RS06555 and HMPREF1078_RS06560 are separated by 75 nucleotides HMPREF1078_RS06515: HMPREF1078_RS06515 - sulfate permease, at 684,955 to 686,631 _RS06515 HMPREF1078_RS19535: HMPREF1078_RS19535 - hypothetical protein, at 686,717 to 686,881 _RS19535 HMPREF1078_RS19800: HMPREF1078_RS19800 - trypsin-like serine protease, at 687,046 to 688,503 _RS19800 HMPREF1078_RS19805: HMPREF1078_RS19805 - T9SS type A sorting domain-containing protein, at 688,493 to 689,848 _RS19805 HMPREF1078_RS06530: HMPREF1078_RS06530 - radical SAM protein, at 689,921 to 690,700 _RS06530 HMPREF1078_RS06535: HMPREF1078_RS06535 - helix-hairpin-helix domain-containing protein, at 690,787 to 692,724 _RS06535 HMPREF1078_RS06540: HMPREF1078_RS06540 - hypothetical protein, at 692,827 to 693,633 _RS06540 HMPREF1078_RS06545: HMPREF1078_RS06545 - DUF4294 domain-containing protein, at 693,876 to 694,481 _RS06545 HMPREF1078_RS06550: HMPREF1078_RS06550 - RNA methyltransferase, at 694,473 to 695,003 _RS06550 HMPREF1078_RS06555: HMPREF1078_RS06555 - quinolinate synthase NadA, at 695,758 to 696,744 _RS06555 HMPREF1078_RS06560: HMPREF1078_RS06560 - two-component regulator propeller domain-containing protein, at 696,820 to 699,150 _RS06560
Locus Name Description Strand Phenotype
HMPREF1078_RS06515 HMPREF1078_RS06515 sulfate permease + cofit
HMPREF1078_RS19535 HMPREF1078_RS19535 hypothetical protein - no data
HMPREF1078_RS19800 HMPREF1078_RS19800 trypsin-like serine protease + insig.
HMPREF1078_RS19805 HMPREF1078_RS19805 T9SS type A sorting domain-containing protein + insig.
HMPREF1078_RS06530 HMPREF1078_RS06530 radical SAM protein - strong
HMPREF1078_RS06535 HMPREF1078_RS06535 helix-hairpin-helix domain-containing protein - cofit
HMPREF1078_RS06540 HMPREF1078_RS06540 hypothetical protein - insig.
HMPREF1078_RS06545 HMPREF1078_RS06545 DUF4294 domain-containing protein + strong
HMPREF1078_RS06550 HMPREF1078_RS06550 RNA methyltransferase - strong
HMPREF1078_RS06555 HMPREF1078_RS06555 quinolinate synthase NadA + no data
HMPREF1078_RS06560 HMPREF1078_RS06560 two-component regulator propeller domain-containing protein - strong

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