Gene info for HMPREF1078_RS06485 in Parabacteroides merdae CL09T00C40

Annotation: efflux RND transporter permease subunit
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 674,051 to 677,158
See nucleotide sequence around HMPREF1078_RS06485 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS06450 and HMPREF1078_RS06455 are separated by 222 nucleotidesHMPREF1078_RS06455 and HMPREF1078_RS06460 are separated by 134 nucleotidesHMPREF1078_RS06460 and HMPREF1078_RS06475 are separated by 1107 nucleotidesHMPREF1078_RS06475 and HMPREF1078_RS06480 are separated by 55 nucleotidesHMPREF1078_RS06480 and HMPREF1078_RS06485 overlap by 4 nucleotidesHMPREF1078_RS06485 and HMPREF1078_RS06490 overlap by 4 nucleotidesHMPREF1078_RS06490 and HMPREF1078_RS06495 are separated by 7 nucleotidesHMPREF1078_RS06495 and HMPREF1078_RS06500 are separated by 13 nucleotidesHMPREF1078_RS06500 and HMPREF1078_RS06505 are separated by 16 nucleotidesHMPREF1078_RS06505 and HMPREF1078_RS06510 are separated by 164 nucleotides HMPREF1078_RS06450: HMPREF1078_RS06450 - L-fucose/L-arabinose isomerase family protein, at 661,461 to 662,891 _RS06450 HMPREF1078_RS06455: HMPREF1078_RS06455 - DNA mismatch repair protein MutS, at 663,114 to 665,753 _RS06455 HMPREF1078_RS06460: HMPREF1078_RS06460 - arylsulfatase, at 665,888 to 667,339 _RS06460 HMPREF1078_RS06475: HMPREF1078_RS06475 - hypothetical protein, at 668,447 to 669,160 _RS06475 HMPREF1078_RS06480: HMPREF1078_RS06480 - efflux RND transporter permease subunit, at 669,216 to 674,054 _RS06480 HMPREF1078_RS06485: HMPREF1078_RS06485 - efflux RND transporter permease subunit, at 674,051 to 677,158 _RS06485 HMPREF1078_RS06490: HMPREF1078_RS06490 - efflux RND transporter periplasmic adaptor subunit, at 677,155 to 678,207 _RS06490 HMPREF1078_RS06495: HMPREF1078_RS06495 - TolC family protein, at 678,215 to 679,714 _RS06495 HMPREF1078_RS06500: HMPREF1078_RS06500 - hypothetical protein, at 679,728 to 683,000 _RS06500 HMPREF1078_RS06505: HMPREF1078_RS06505 - ABC transporter ATP-binding protein, at 683,017 to 683,910 _RS06505 HMPREF1078_RS06510: HMPREF1078_RS06510 - rubrerythrin family protein, at 684,075 to 684,653 _RS06510
Locus Name Description Strand Phenotype
HMPREF1078_RS06450 HMPREF1078_RS06450 L-fucose/L-arabinose isomerase family protein + insig.
HMPREF1078_RS06455 HMPREF1078_RS06455 DNA mismatch repair protein MutS - sig.
HMPREF1078_RS06460 HMPREF1078_RS06460 arylsulfatase + insig.
HMPREF1078_RS06475 HMPREF1078_RS06475 hypothetical protein - insig.
HMPREF1078_RS06480 HMPREF1078_RS06480 efflux RND transporter permease subunit - insig.
HMPREF1078_RS06485 HMPREF1078_RS06485 efflux RND transporter permease subunit - insig.
HMPREF1078_RS06490 HMPREF1078_RS06490 efflux RND transporter periplasmic adaptor subunit - insig.
HMPREF1078_RS06495 HMPREF1078_RS06495 TolC family protein - insig.
HMPREF1078_RS06500 HMPREF1078_RS06500 hypothetical protein - insig.
HMPREF1078_RS06505 HMPREF1078_RS06505 ABC transporter ATP-binding protein - cofit
HMPREF1078_RS06510 HMPREF1078_RS06510 rubrerythrin family protein - sig.

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