Gene info for HMPREF1078_RS06070 in Parabacteroides merdae CL09T00C40

Annotation: helix-turn-helix domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976525, - strand, nucleotides 557,529 to 558,404
See nucleotide sequence around HMPREF1078_RS06070 or for all of scaffold NZ_JH976525

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS06045 and HMPREF1078_RS06050 are separated by 30 nucleotidesHMPREF1078_RS06050 and HMPREF1078_RS06055 are separated by 12 nucleotidesHMPREF1078_RS06055 and HMPREF1078_RS06060 are separated by 5 nucleotidesHMPREF1078_RS06060 and HMPREF1078_RS06065 are separated by 29 nucleotidesHMPREF1078_RS06065 and HMPREF1078_RS06070 are separated by 136 nucleotidesHMPREF1078_RS06070 and HMPREF1078_RS06075 are separated by 133 nucleotidesHMPREF1078_RS06075 and HMPREF1078_RS06080 are separated by 818 nucleotidesHMPREF1078_RS06080 and HMPREF1078_RS06085 overlap by 4 nucleotidesHMPREF1078_RS06085 and HMPREF1078_RS06090 are separated by 150 nucleotidesHMPREF1078_RS06090 and HMPREF1078_RS06095 overlap by 4 nucleotides HMPREF1078_RS06045: HMPREF1078_RS06045 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 550,108 to 553,107 _RS06045 HMPREF1078_RS06050: HMPREF1078_RS06050 - sodium/sugar symporter, at 553,138 to 554,691 _RS06050 HMPREF1078_RS06055: HMPREF1078_RS06055 - SDR family oxidoreductase, at 554,704 to 555,495 _RS06055 HMPREF1078_RS06060: HMPREF1078_RS06060 - mandelate racemase/muconate lactonizing enzyme family protein, at 555,501 to 556,670 _RS06060 HMPREF1078_RS06065: HMPREF1078_RS06065 - RraA family protein, at 556,700 to 557,392 _RS06065 HMPREF1078_RS06070: HMPREF1078_RS06070 - helix-turn-helix domain-containing protein, at 557,529 to 558,404 _RS06070 HMPREF1078_RS06075: HMPREF1078_RS06075 - glycoside hydrolase family 2 TIM barrel-domain containing protein, at 558,538 to 561,945 _RS06075 HMPREF1078_RS06080: HMPREF1078_RS06080 - IS3 family transposase, at 562,764 to 563,672 _RS06080 HMPREF1078_RS06085: HMPREF1078_RS06085 - hypothetical protein, at 563,669 to 564,097 _RS06085 HMPREF1078_RS06090: HMPREF1078_RS06090 - IS3 family transposase, at 564,248 to 565,156 _RS06090 HMPREF1078_RS06095: HMPREF1078_RS06095 - hypothetical protein, at 565,153 to 565,581 _RS06095
Locus Name Description Strand Phenotype
HMPREF1078_RS06045 HMPREF1078_RS06045 glycoside hydrolase family 2 TIM barrel-domain containing protein - insig.
HMPREF1078_RS06050 HMPREF1078_RS06050 sodium/sugar symporter - insig.
HMPREF1078_RS06055 HMPREF1078_RS06055 SDR family oxidoreductase - insig.
HMPREF1078_RS06060 HMPREF1078_RS06060 mandelate racemase/muconate lactonizing enzyme family protein - insig.
HMPREF1078_RS06065 HMPREF1078_RS06065 RraA family protein - insig.
HMPREF1078_RS06070 HMPREF1078_RS06070 helix-turn-helix domain-containing protein - insig.
HMPREF1078_RS06075 HMPREF1078_RS06075 glycoside hydrolase family 2 TIM barrel-domain containing protein - insig.
HMPREF1078_RS06080 HMPREF1078_RS06080 IS3 family transposase - no data
HMPREF1078_RS06085 HMPREF1078_RS06085 hypothetical protein - no data
HMPREF1078_RS06090 HMPREF1078_RS06090 IS3 family transposase - no data
HMPREF1078_RS06095 HMPREF1078_RS06095 hypothetical protein - no data

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